RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ANO3Q9BYT9 981 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 DCLK3Q9C098 648 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 KIAA1586Q9HCI6 787 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 NPHS2Q9NP85 383 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 LMCD1Q9NZU5 365 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 FRMD4BQ9Y2L6 1034 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 SH3BP1Q9Y3L3 701 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 EXOC1LA0A1B0GW35 172 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 DDTLA6NHG4 134 aaPredicted RBP18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 GSC2O15499 205 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 CYP1A2P05177 515 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 FGFR1P11362 822 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 CYP4A11Q02928 519 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 KBTBD2Q8IY47 623 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 DTX3LQ8TDB6 740 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 DMAC2Q9NW81 257 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 STX18Q9P2W9 335 aaKnown RBP18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 GSTTP1A0A1W2PQM5 241 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 MAP3K7O43318 606 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 TCP10Q12799 353 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 PKN2Q16513 984 aaKnown RBP18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 CERKLQ49MI3 558 aaPredicted RBP18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 PLEKHG4Q58EX7 1191 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 CIAPIN1Q6FI81 312 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 C4orf33Q8N1A6 199 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 PTCD3Q96EY7 689 aaKnown RBP18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 CCDC17Q96LX7 622 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 HERPUD2Q9BSE4 406 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 PLVAPQ9BX97 442 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 SYNCQ9H7C4 482 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 ARL8BQ9NVJ2 186 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 KANSL3Q9P2N6 904 aa18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 ZBTB12Q9Y330 459 aaPredicted RBP18.73■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L10C9JJH3 530 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 ZBTB5O15062 677 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 FAM13AO94988 1023 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 ZWINTO95229 277 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 SGPL1O95470 568 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 SLC16A2P36021 539 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 DLGAP5Q15398 846 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 GSTA3Q16772 222 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 PRR16Q569H4 304 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 NSMFQ6X4W1 530 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 SDCCAG8Q86SQ7 713 aaPredicted RBP18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 ZNF398Q8TD17 642 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 ZNF653Q96CK0 615 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 SMC6Q96SB8 1091 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 KRT82Q9NSB4 513 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 UBTFL6P0CB48 400 aaPredicted RBP18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 MAGEA4P43358 317 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 HHATQ5VTY9 493 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 FYB2Q5VWT5 728 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 IZUMO3Q5VZ72 239 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 MYCT1Q8N699 235 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 ZNF75CPQ92670 426 aaPredicted RBP18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 ZNF184Q99676 751 aaPredicted RBP18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 AGPAT3Q9NRZ7 376 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 RABGAP1Q9Y3P9 1069 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 NEU2Q9Y3R4 380 aa18.72■□□□□ 0.59
CDKN1B-201ENST00000228872 PYGBP11216 843 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 GZMAP12544 262 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 CA4P22748 312 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 BFSP1Q12934 665 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 CNPY1Q3B7I2 92 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 WDR72Q3MJ13 1102 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 RINT1Q6NUQ1 792 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 HS2ST1Q7LGA3 356 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 NOP9Q86U38 636 aaKnown RBP18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 TDRPQ86YL5 185 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 ARHGAP18Q8N392 663 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 WDR60Q8WVS4 1066 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 TMOD2Q9NZR1 351 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 ZNF212Q9UDV6 495 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 R3HDM2Q9Y2K5 976 aaKnown RBP18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 HAUS5O94927 633 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 KRT15P19012 456 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 EPS8L1Q8TE68 723 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 NCSTNQ92542 709 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 STMN2Q93045 179 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 NR1H4Q96RI1 486 aaPredicted RBP18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 NDNQ99608 321 aa18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 NOCTQ9UK39 431 aaKnown RBP18.71■□□□□ 0.59
CDKN1B-201ENST00000228872 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 GYG2O15488 501 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 CYP1A1P04798 512 aaPredicted RBP18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 SPDYE2Q495Y8 402 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 TATDN1Q6P1N9 297 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 MOXD1Q6UVY6 613 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 BBOF1Q8ND07 529 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 NLGN2Q8NFZ4 835 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 ZBED3Q96IU2 234 aaPredicted RBP18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 CFAP57Q96MR6 1250 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 RBM15Q96T37 977 aaKnown RBP eCLIP18.7■□□□□ 0.582e-7■■■■□ 26.4
CDKN1B-201ENST00000228872 OCEL1Q9H607 264 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 UVRAGQ9P2Y5 699 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 ZNF70Q9UC06 446 aaPredicted RBP18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 GTF3C4Q9UKN8 822 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 POC1B-GALNT4F8VUJ3 575 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 CREB3O43889 395 aa18.7■□□□□ 0.58
CDKN1B-201ENST00000228872 LYNP07948 512 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms