RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 GRID1Q9ULK0 1009 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 COL16A1Q07092 1604 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ITSN1Q15811 1721 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 FMN2Q9NZ56 1722 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 C2orf72A6NCS6 295 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SMCO2A6NFE2 343 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SRRM3A6NNA2 597 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 H0YCG3 227 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PPEF1O14829 653 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 IDH3BO43837 385 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 STX10O60499 249 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 NIPSNAP2O75323 286 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PRPF6O94906 941 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CALB1P05937 261 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 HMOX1P09601 288 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 HPGDP15428 266 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ITGAXP20702 1163 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SLCO1A2P46721 670 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 RAP1GDS1P52306 607 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ARHGDIBP52566 201 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ADARP55265 1226 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 STX17P56962 302 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 IL1RL1Q01638 556 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TFAP4Q01664 338 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 FAM69CQ0P6D2 419 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 NCAPHQ15003 741 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PON2Q15165 354 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD20A4Q4UJ75 823 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 FBXO48Q5FWF7 155 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 MAP3K21Q5TCX8 1036 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD20A1Q5TYW2 823 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 HAUS3Q68CZ6 603 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ATL3Q6DD88 541 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF425Q6IV72 752 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 XRRA1Q6P2D8 792 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 MZT2AQ6P582 158 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 GALNT5Q7Z7M9 940 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 C2orf69Q8N8R5 385 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF565Q8N9K5 539 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 C3orf58Q8NDZ4 430 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 DNAJB8Q8NHS0 232 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TRPC4APQ8TEL6 797 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ANAPC16Q96DE5 110 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 DEPDC7Q96QD5 511 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 LLPHQ9BRT6 129 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SHCBP1LQ9BZQ2 653 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 UBE2OQ9C0C9 1292 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TMEM245Q9H330 911 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKZF1Q9H8Y5 726 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TRPC7Q9HCX4 862 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC40A1Q9NP59 571 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 GPHNQ9NQX3 736 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT84Q9NSB2 600 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 EPS15L1Q9UBC2 864 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 RTCBQ9Y3I0 505 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TIMM22Q9Y584 194 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TACC3Q9Y6A5 838 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SNCAIPQ9Y6H5 919 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 VWA3AA6NCI4 1184 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 RRN3P2A6NIE6 340 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 F8W8V4 182 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PSMD9O00233 223 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ATP2C2O75185 946 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ARHGEF15O94989 841 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC34A2O95436 690 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CD4P01730 458 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PGRP06401 933 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PYGMP11217 842 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 HOXB3P14651 431 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CAP2P40123 477 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 RFC5P40937 340 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CD86P42081 329 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 MTIF2P46199 727 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 EIF2B2P49770 351 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 AK2P54819 239 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PPP2R2AP63151 447 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ART3Q13508 389 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TSC22D1Q15714 1073 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 FAM26DQ5JW98 314 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TTLL7Q6ZT98 887 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 C11orf57Q6ZUT1 292 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TPH2Q8IWU9 490 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CHERPQ8IWX8 916 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 NELFCDQ8IXH7 590 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SRRM1Q8IYB3 904 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF321PQ8N8H1 164 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ADAMTS19Q8TE59 1207 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC16A10Q8TF71 515 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TNFRSF25Q93038 417 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PMEPA1Q969W9 287 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SYTL4Q96C24 671 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CHMP6Q96FZ7 201 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD27Q96NW4 1050 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CLIC6Q96NY7 704 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TMEM237Q96Q45 408 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 YIPF4Q9BSR8 244 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 MKNK1Q9BUB5 465 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CALN1Q9BXU9 219 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms