RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 TRIM72Q6ZMU5 477 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 LRRC71Q8N4P6 559 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 BBXQ8WY36 941 aaPredicted RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 DDX27Q96GQ7 796 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 RUNDC3BQ96NL0 473 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 ACO2Q99798 780 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 MRPL4Q9BYD3 311 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 PABPC3Q9H361 631 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 ADAM22Q9P0K1 906 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 DCDC2CA8MYV0 355 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 MYO1CO00159 1063 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 THAP12O43422 761 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 TOM1L1O75674 476 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 IREB2P48200 963 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 EFNA5P52803 228 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 PTP4A2Q12974 167 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 KRT71Q3SY84 523 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 CDCA2Q69YH5 1023 aaPredicted RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 RNF25Q96BH1 459 aaPredicted RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 FAM167AQ96KS9 214 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 TCHPQ9BT92 498 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 PLVAPQ9BX97 442 aa19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 NOVA2Q9UNW9 492 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-208ENST00000548436 O00370 1275 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 LGR5O75473 907 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 PROSCO94903 275 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 GBP1P32455 592 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 MAMLD1Q13495 774 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 SGO2Q562F6 1265 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 CELF3Q5SZQ8 465 aaKnown RBP19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 UBAP2Q5T6F2 1119 aaKnown RBP19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 PHF13Q86YI8 300 aaPredicted RBP19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 UBR7Q8N806 425 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 RNF149Q8NC42 400 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 FHDC1Q9C0D6 1143 aaPredicted RBP19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 MTMR12Q9C0I1 747 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 RBPJLQ9UBG7 517 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 PARP2Q9UGN5 583 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 PASKQ96RG2 1323 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 ABLIM1O14639 778 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 ASS1P00966 412 aaKnown RBP19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 NUDT17P0C025 328 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 ZNF132P52740 706 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 EIF3BP55884 814 aaKnown RBP19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 PPARDQ03181 441 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 IFFO1Q0D2I5 559 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 SNX1Q13596 522 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 LIN9Q5TKA1 542 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 MMS22LQ6ZRQ5 1243 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 ERO1BQ86YB8 467 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 WDR49Q8IV35 697 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 ART4Q93070 314 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 CHST7Q9NS84 486 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 SLC12A6Q9UHW9 1150 aa19.74■□□□□ 0.75
PRPF40B-208ENST00000548436 IGKV6-21A0A0C4DH24 114 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 ECEL1O95672 775 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 SLC25A27O95847 323 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 PRKCBP05771 671 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 PTGISQ16647 500 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 TMEM63BQ5T3F8 832 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 PLEKHA7Q6IQ23 1121 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 ARFGAP2Q8N6H7 521 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 ZNF606Q8WXB4 792 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 ATG4AQ8WYN0 398 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 SLCO2A1Q92959 643 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 FAM212AQ96EL1 285 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 VCPIP1Q96JH7 1222 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 EPN3Q9H201 632 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 SEMA4AQ9H3S1 761 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 PPME1Q9Y570 386 aa19.73■□□□□ 0.75
PRPF40B-208ENST00000548436 ANKRD65E5RJM6 399 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 NOP56O00567 594 aaKnown RBP19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 CXCL11O14625 94 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 GJB6O95452 261 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 TAS2R40P59535 323 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 MYL6P60660 151 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 MAGOHP61326 146 aaKnown RBP19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 GRM1Q13255 1194 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 MXD4Q14582 209 aaPredicted RBP19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 PLCB4Q15147 1175 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 TRAPPC12Q8WVT3 735 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 TCP11Q8WWU5 503 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 IMPG2Q9BZV3 1241 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 MTRF1LQ9UGC7 380 aaKnown RBP19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 AGTPBP1Q9UPW5 1226 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 DNAJC25-GNG10A0A024R161 153 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 TRIM66O15016 1216 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 OGTO15294 1046 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 TP73O15350 636 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 CAND2O75155 1236 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 GJB1P08034 283 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 AP3M2P53677 418 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 MCL1Q07820 350 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 SLC29A2Q14542 456 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 PPP1R7Q15435 360 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 MAPK6Q16659 721 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 ODF2Q5BJF6 829 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 PLPPR4Q7Z2D5 763 aa19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 FBXO16Q8IX29 292 aaPredicted RBP19.72■□□□□ 0.75
PRPF40B-208ENST00000548436 COPS5Q92905 334 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms