RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 EFCAB14O75071 495 aa15.2■□□□□ 0.02
GABPA-202ENST00000400075 GRAP2O75791 330 aa15.2■□□□□ 0.02
GABPA-202ENST00000400075 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
GABPA-202ENST00000400075 SPOPLQ6IQ16 392 aa15.2■□□□□ 0.02
GABPA-202ENST00000400075 UBA3Q8TBC4 463 aa15.2■□□□□ 0.02
GABPA-202ENST00000400075 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
GABPA-202ENST00000400075 MTMR12Q9C0I1 747 aa15.2■□□□□ 0.02
GABPA-202ENST00000400075 SARS2Q9NP81 518 aaKnown RBP15.2■□□□□ 0.02
GABPA-202ENST00000400075 DDX56Q9NY93 547 aaKnown RBP15.2■□□□□ 0.02
GABPA-202ENST00000400075 TLR2O60603 784 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 CAPN2P17655 700 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 AKAP5P24588 427 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 KLC3Q6P597 504 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 TAS2R42Q7RTR8 314 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 C7orf61Q8IZ16 206 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 ROBO1Q9Y6N7 1651 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 FSTL1Q12841 308 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 PTPAQ15257 358 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 LBX2Q6XYB7 198 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 CDKL3Q8IVW4 592 aaPredicted RBP15.19■□□□□ 0.02
GABPA-202ENST00000400075 PBXIP1Q96AQ6 731 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 PI4K2AQ9BTU6 479 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 ASTN2O75129 1339 aaPredicted RBP15.19■□□□□ 0.02
GABPA-202ENST00000400075 PRR23AA6NEV1 266 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 MCF2P10911 925 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 RARRES1P49788 294 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 ASAP3Q8TDY4 903 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.19■□□□□ 0.02
GABPA-202ENST00000400075 E5RI56 91 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 P4HA2O15460 535 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 KPNA1P52294 538 aaPredicted RBP15.19■□□□□ 0.02
GABPA-202ENST00000400075 ZNF177Q13360 481 aaPredicted RBP15.19■□□□□ 0.02
GABPA-202ENST00000400075 PYROXD1Q8WU10 500 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 MRPL17Q9NRX2 175 aaKnown RBP15.19■□□□□ 0.02
GABPA-202ENST00000400075 DBR1Q9UK59 544 aaKnown RBP15.19■□□□□ 0.02
GABPA-202ENST00000400075 PCDHB5Q9Y5E4 795 aa15.19■□□□□ 0.02
GABPA-202ENST00000400075 HGSO14964 777 aaPredicted RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 FGGP02679 453 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 INHAP05111 366 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 TROVE2P10155 538 aaKnown RBP eCLIP15.18■□□□□ 0.02
GABPA-202ENST00000400075 ATXN3P54252 364 aaPredicted RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 CEP85LQ5SZL2 805 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 GPAT2Q6NUI2 795 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 ACOT1Q86TX2 421 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 RPRD1AQ96P16 312 aaPredicted RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 COL14A1Q05707 1796 aaKnown RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 ACKR2O00590 384 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 AOC2O75106 756 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 SMIM10L2AP0DMW4 78 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 SMIM10L2BP0DMW5 78 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 TWF1Q12792 350 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 PLD1Q13393 1074 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 THEMIS2Q5TEJ8 643 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 CCDC62Q6P9F0 684 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 METTL16Q86W50 562 aaKnown RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 VSIG1Q86XK7 387 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 GAD1Q99259 594 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 CIPCQ9C0C6 399 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 ATXN3LQ9H3M9 355 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 CATSPERBQ9H7T0 1116 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 KIAA1257Q9ULG3 409 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 SYNCRIPO60506 623 aaKnown RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 ZNF189O75820 626 aaPredicted RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 CTDNEP1O95476 244 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 STARD3Q14849 445 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 TATDN1Q6P1N9 297 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 CENPUQ71F23 418 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 ZNF467Q7Z7K2 595 aaPredicted RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 RAB42Q8N4Z0 105 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 SCFD1Q8WVM8 642 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 GNRH1P01148 92 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 CDC25BP30305 580 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 MRPS6P82932 125 aaKnown RBP15.18■□□□□ 0.02
GABPA-202ENST00000400075 DUSP28Q4G0W2 176 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 FRA10AC1Q70Z53 315 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 CBWD2Q8IUF1 395 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 TNS4Q8IZW8 715 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 DDI1Q8WTU0 396 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 DDIT4Q9NX09 232 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 NRBP1Q9UHY1 535 aa15.18■□□□□ 0.02
GABPA-202ENST00000400075 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.17■□□□□ 0.02
GABPA-202ENST00000400075 EBAG9O00559 213 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 DNAJC6O75061 913 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 FGBP02675 491 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 CXCL8P10145 99 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 CRHR2Q13324 411 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 MMS22LQ6ZRQ5 1243 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 ATPAF2Q8N5M1 289 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.17■□□□□ 0.02
GABPA-202ENST00000400075 SCG3Q8WXD2 468 aaKnown RBP15.17■□□□□ 0.02
GABPA-202ENST00000400075 CFAP36Q96G28 342 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 CDC23Q9UJX2 597 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 TIMM13Q9Y5L4 95 aaPredicted RBP15.17■□□□□ 0.02
GABPA-202ENST00000400075 FAM86B1E9PN63 330 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 FAM86B2P0C5J1 330 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 PPM1AP35813 382 aa15.17■□□□□ 0.02
GABPA-202ENST00000400075 TUFMP49411 452 aaKnown RBP15.17■□□□□ 0.02
GABPA-202ENST00000400075 NDUFV1P49821 464 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms