RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SKIDA1Q1XH10 827 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 ZKSCAN2Q63HK3 967 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 MCTP2Q6DN12 878 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 TRMT10BQ6PF06 316 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 BRAPQ7Z569 592 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 PROSER1Q86XN7 944 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 FOXP4Q8IVH2 680 aaPredicted RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCAR1Q8IX12 1150 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 RBM12BQ8IXT5 1001 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 TXNDC5Q8NBS9 432 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 GPRC5AQ8NFJ5 357 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 SSH3Q8TE77 659 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 SH3RF2Q8TEC5 729 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 YTHDC1Q96MU7 727 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 FEZ1Q99689 392 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 TMEM168Q9H0V1 697 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 PORCNQ9H237 461 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 GPR108Q9NPR9 543 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 RIC8BQ9NVN3 520 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 RBPJLQ9UBG7 517 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 DBNLQ9UJU6 430 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 CNOT11Q9UKZ1 510 aaKnown RBP6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 CBLCQ9ULV8 474 aa6.26□□□□□ -1.41
RNU4-4P-201ENST00000364588 FRMPD3Q5JV73 1810 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 C19orf81C9J6K1 198 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 MAN2B1O00754 1011 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 PLD2O14939 933 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 GH2P01242 217 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 CELA3BP08861 270 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 ZKSCAN1P17029 563 aaPredicted RBP6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 KRT15P19012 456 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 DNM2P50570 870 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 SMAD2Q15796 467 aaKnown RBP6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 MAP3K21Q5TCX8 1036 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 BTBD8Q5XKL5 378 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 GPR142Q7Z601 462 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 PTRH1Q86Y79 214 aaKnown RBP6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 ITPRIPQ8IWB1 547 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 FTSJ3Q8IY81 847 aaKnown RBP6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 LILRB2Q8N423 598 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 MAGEB6Q8N7X4 407 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 SLC7A14Q8TBB6 771 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 IGDCC4Q8TDY8 1250 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 SOCS4Q8WXH5 440 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 ZCCHC14Q8WYQ9 949 aaKnown RBP6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 BDH2Q9BUT1 245 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 C11orf49Q9H6J7 331 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 BARX1Q9HBU1 254 aaPredicted RBP6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 ARHGAP20Q9P2F6 1191 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 ZFP69BQ9UJL9 534 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 OGDHLQ9ULD0 1010 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 PFASO15067 1338 aa6.25□□□□□ -1.41
RNU4-4P-201ENST00000364588 COL6A3P12111 3177 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 NAV1Q8NEY1 1877 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 A0A1W2PPC1 479 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 TCRBV5S4A2TA0A5A2 114 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 B4E1Z4 1266 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 PRRG2O14669 202 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 CLASP2O75122 1294 aaKnown RBP6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 RASGRP1O95267 797 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 CAPN2P17655 700 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCND3P30281 292 aaPredicted RBP6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 MAPK4P31152 587 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 RGS2P41220 211 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 MAGEA10P43363 369 aaPredicted RBP6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 RTP5Q14D33 572 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 SURF1Q15526 300 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 KLHL36Q8N4N3 616 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 CISD2Q8N5K1 135 aaKnown RBP6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 SLC17A8Q8NDX2 589 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 ACER1Q8TDN7 264 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 GDF15Q99988 308 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 ARHGAP28Q9P2N2 729 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 SERPINB13Q9UIV8 391 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 WASF3Q9UPY6 502 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 EXOC6BQ9Y2D4 811 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 NOP58Q9Y2X3 529 aaKnown RBP6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 DNAH12Q6ZR08 3092 aa6.24□□□□□ -1.41
RNU4-4P-201ENST00000364588 PRAMEF25A6NGN4 478 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 ACOT7O00154 380 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 CNMDO75829 334 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 AMY2AP04746 511 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 CKMP06732 381 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 VCAM1P19320 739 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 AMY2BP19961 511 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 PLCD1P51178 756 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 MLLT6P55198 1093 aaPredicted RBP6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 JAM2P57087 298 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 PFKPQ01813 784 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 DBPQ10586 325 aaPredicted RBP6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 MAP3K12Q12852 859 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 LRRC26Q2I0M4 334 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 ABCB5Q2M3G0 1257 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 CCDC144BQ3MJ40 725 aa6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 CERKLQ49MI3 558 aaPredicted RBP6.23□□□□□ -1.41
RNU4-4P-201ENST00000364588 FNDC3BQ53EP0 1204 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms