RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 IKZF4Q9H2S9 585 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 ZNF768Q9H5H4 540 aaKnown RBP4.38□□□□□ -1.71
SRP54-214ENST00000630962 TYW1Q9NV66 732 aaKnown RBP4.38□□□□□ -1.71
SRP54-214ENST00000630962 TBCCD1Q9NVR7 557 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 POLHQ9Y253 713 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 PNPLA7Q6ZV29 1317 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 KATNA1O75449 491 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 ERN1O75460 977 aaKnown RBP4.37□□□□□ -1.71
SRP54-214ENST00000630962 AMY1AP04745 511 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 FTH1P19P0C7X4 201 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 C5AR1P21730 350 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 PCSK1P29120 753 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 ZEB1P37275 1124 aaPredicted RBP4.37□□□□□ -1.71
SRP54-214ENST00000630962 ANAPC15P60006 121 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 KIF23Q02241 960 aaPredicted RBP4.37□□□□□ -1.71
SRP54-214ENST00000630962 ABCB5Q2M3G0 1257 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 HECTD2Q5U5R9 776 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 CAVIN3Q969G5 261 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 COA7Q96BR5 231 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 TMX3Q96JJ7 454 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 TEKT5Q96M29 485 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 PUS7Q96PZ0 661 aaKnown RBP4.37□□□□□ -1.71
SRP54-214ENST00000630962 MLST8Q9BVC4 326 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 PACSIN1Q9BY11 444 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 ALOXE3Q9BYJ1 711 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 LDAHQ9H6V9 325 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 SIDT1Q9NXL6 827 aaKnown RBP4.37□□□□□ -1.71
SRP54-214ENST00000630962 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
SRP54-214ENST00000630962 MTO1Q9Y2Z2 717 aaKnown RBP4.37□□□□□ -1.71
SRP54-214ENST00000630962 COL4A3Q01955 1670 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 ANKRD62A6NC57 917 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 KIAA0391O15091 583 aaKnown RBP4.36□□□□□ -1.71
SRP54-214ENST00000630962 HTRA2O43464 458 aaPredicted RBP4.36□□□□□ -1.71
SRP54-214ENST00000630962 ORC4O43929 436 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 FDXRP22570 491 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 CYP2C19P33261 490 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 FAM189BP81408 668 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 EXOSC10Q01780 885 aaKnown RBP4.36□□□□□ -1.71
SRP54-214ENST00000630962 PIGFQ07326 219 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 ZNF844Q08AG5 666 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 TMEM240Q5SV17 173 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 OR2I1PQ8NGU4 316 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 DPF2Q92785 391 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 ZG16BQ96DA0 208 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 WDR11Q9BZH6 1224 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 SIK2Q9H0K1 926 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 GSTO2Q9H4Y5 243 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 RLIMQ9NVW2 624 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 JKAMPQ9P055 326 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 TESQ9UGI8 421 aaKnown RBP4.36□□□□□ -1.71
SRP54-214ENST00000630962 SLC23A1Q9UHI7 598 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 TUBD1Q9UJT1 453 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 IPPQ9Y573 584 aa4.36□□□□□ -1.71
SRP54-214ENST00000630962 GRID2IPA4D2P6 1211 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 GNAI3P08754 354 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 EGR2P11161 476 aaPredicted RBP4.35□□□□□ -1.71
SRP54-214ENST00000630962 FPR1P21462 350 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 FGFR4P22455 802 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 SMARCA1P28370 1054 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 GNAI1P63096 354 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 CXADRP78310 365 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 OCA2Q04671 838 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 FSTL1Q12841 308 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 MPP3Q13368 585 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 FAM50AQ14320 339 aaKnown RBP4.35□□□□□ -1.71
SRP54-214ENST00000630962 UAP1L1Q3KQV9 507 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 Q6YL49 198 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 UBE3BQ7Z3V4 1068 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 FBXO18Q8NFZ0 1043 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 TBC1D15Q8TC07 691 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 IFI44Q8TCB0 444 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 LINC00476Q8WZB0 136 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 NELL1Q92832 810 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 CHMP4CQ96CF2 233 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 CLPTM1LQ96KA5 538 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 FAM167AQ96KS9 214 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 NUP88Q99567 741 aaPredicted RBP4.35□□□□□ -1.71
SRP54-214ENST00000630962 ANKFY1Q9P2R3 1169 aa4.35□□□□□ -1.71
SRP54-214ENST00000630962 RUVBL1Q9Y265 456 aaKnown RBP4.35□□□□□ -1.71
SRP54-214ENST00000630962 hCG_2014768A0A024R1R8 64 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 E2F8A0AVK6 867 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 CCDC154A6NI56 674 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 FZD9O00144 591 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 GRM6O15303 877 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 PCDHGA12O60330 932 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 SLC43A1O75387 559 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 SOAT2O75908 522 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 SPDEFO95238 335 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 ESRRBO95718 433 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 CHEK2O96017 543 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 LMNAP02545 664 aaKnown RBP4.34□□□□□ -1.71
SRP54-214ENST00000630962 ITGAMP11215 1152 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 KRT4P19013 534 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 AKAP5P24588 427 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 ZFP36P26651 326 aaKnown RBP4.34□□□□□ -1.71
SRP54-214ENST00000630962 PCBP2Q15366 365 aaKnown RBP eCLIP4.34□□□□□ -1.71
SRP54-214ENST00000630962 CRB2Q5IJ48 1285 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 STRIP1Q5VSL9 837 aa4.34□□□□□ -1.71
SRP54-214ENST00000630962 B3GNTL1Q67FW5 361 aaPredicted RBP4.34□□□□□ -1.71
SRP54-214ENST00000630962 SP5Q6BEB4 398 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms