RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 FBF1Q8TES7 1133 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 LEO1Q8WVC0 666 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 HDAC2Q92769 488 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 P3H4Q92791 437 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ELAC2Q9BQ52 826 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 RTFDC1Q9BY42 306 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 MRPL1Q9BYD6 325 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SEMA4AQ9H3S1 761 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ACAD9Q9H845 621 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ABCC4O15439 1325 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 NCF1BA6NI72 391 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ZSCAN5BA6NJL1 495 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 NCF1CA8MVU1 366 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 RASSF9O75901 435 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 RHOBTB1O94844 696 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PENKP01210 267 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 GLAP06280 429 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 MYL4P12829 197 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PAMP19021 973 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 IL10P22301 178 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CCND1P24385 295 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 WEE1P30291 646 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 TMPOP42166 694 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT6CP48668 564 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PHEXP78562 749 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 RELQ04864 619 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 TRAP1Q12931 704 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 TRIM28Q13263 835 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CAMK2BQ13554 666 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ATP13A4Q4VNC1 1196 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 DALRD3Q5D0E6 543 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SH3D19Q5HYK7 790 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 C16orf86Q6ZW13 317 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 RNF135Q8IUD6 432 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 KSR1Q8IVT5 923 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ARID3BQ8IVW6 561 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 KIAA2013Q8IYS2 634 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CCNYL1Q8N7R7 359 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ABTB2Q8N961 1025 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 DNAAF3Q8N9W5 541 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 NMD3Q96D46 503 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 NSMCE3Q96MG7 304 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CMTM3Q96MX0 182 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ABCG8Q9H221 673 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 EPC1Q9H2F5 836 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 NCOR1P1Q9H4R4 102 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC39A2Q9NP94 309 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 UCKL1Q9NWZ5 548 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC39A1Q9NY26 324 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 IFNKQ9P0W0 207 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 LARSQ9P2J5 1176 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 TCHHQ07283 1943 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CICQ96RK0 1608 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 WDR19Q8NEZ3 1342 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC162PA2VCL2 907 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 RAB19A4D1S5 217 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ANGPT2O15123 496 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SYNCRIPO60506 623 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ZPR1O75312 459 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ECDO95905 644 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 GNRH1P01148 92 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SFTPCP11686 197 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 GAP43P17677 238 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC9A1P19634 815 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PPARGP37231 505 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PDE1AP54750 535 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 GNGT1P63211 74 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CTAG1AP78358 180 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CYP4A11Q02928 519 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ACY1Q03154 408 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 LGALS3BPQ08380 585 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 MOGQ16653 247 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SGO2Q562F6 1265 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PPP1R15BQ5SWA1 713 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TMEM214Q6NUQ4 689 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CASC4Q6P4E1 433 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TLDC1Q6P9B6 456 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 AAGABQ6PD74 315 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 AGMOQ6ZNB7 445 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CYP4V2Q6ZWL3 525 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 BZW1Q7L1Q6 419 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TMC4Q7Z404 712 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 TLK2Q86UE8 772 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF598Q86UK7 904 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CEP97Q8IW35 865 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 DHX40Q8IX18 779 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 RTKN2Q8IZC4 609 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 APOL6Q9BWW8 343 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 RHOBTB2Q9BYZ6 727 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC8Q9H0W5 538 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 IFT22Q9H7X7 185 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 KAT14Q9H8E8 782 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 PRDM5Q9NQX1 630 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 SDHAF3Q9NRP4 125 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 RMND1Q9NWS8 449 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 STMN3Q9NZ72 180 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 FBXO40Q9UH90 709 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 DDX20Q9UHI6 824 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 DPP7Q9UHL4 492 aa4.1□□□□□ -1.75
R3HDM1-220ENST00000628915 CPSF3Q9UKF6 684 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms