RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CHMLP26374 656 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 RFC5P40937 340 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 FGD1P98174 961 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 ROR1Q01973 937 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 ELF2Q15723 593 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 IFNLR1Q8IU57 520 aaPredicted RBP15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 YAF2Q8IY57 180 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 ZNF461Q8TAF7 563 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 FAM200AQ8TCP9 573 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 CEP170P1Q96L14 293 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 PPME1Q9Y570 386 aa15.4■□□□□ 0.06
NKX3-1-202ENST00000523261 FAM221BA6H8Z2 402 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 CYSRT1A8MQ03 144 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 PRRG1O14668 218 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 SGSM2O43147 1006 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 B4GALT5O43286 388 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 GJA1P17302 382 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 USP11P51784 963 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 MBTD1Q05BQ5 628 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 EMC2Q15006 297 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 CYP4A22Q5TCH4 519 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 SLC27A1Q6PCB7 646 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 TCEAL8Q8IYN2 117 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 HS6ST3Q8IZP7 471 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 TTC8Q8TAM2 541 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 TCP11Q8WWU5 503 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 E2F7Q96AV8 911 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 DDX27Q96GQ7 796 aaKnown RBP15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 CACNA2D2Q9NY47 1150 aa15.39■□□□□ 0.05
NKX3-1-202ENST00000523261 DCLK1O15075 740 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 RHOBTB1O94844 696 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 SEC24AO95486 1093 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 THP07101 528 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 GSPT1P15170 499 aaKnown RBP15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 TKTP29401 623 aaKnown RBP15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 ELF1P32519 619 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 SLC8B1Q6J4K2 584 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 ANKS3Q6ZW76 656 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 CAMKK1Q8N5S9 505 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 CXCL16Q9H2A7 254 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 SNTG2Q9NY99 539 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 GTSE1Q9NYZ3 720 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 WRAP73Q9P2S5 460 aaPredicted RBP15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 BRPF3Q9ULD4 1205 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 SLC8A2Q9UPR5 921 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 INSL5Q9Y5Q6 135 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 ACACAQ13085 2346 aa15.38■□□□□ 0.05
NKX3-1-202ENST00000523261 CELSR3Q9NYQ7 3312 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 TMEM189-UBE2V1I3L0A0 370 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 EML1O00423 815 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 KHNYNO15037 678 aaKnown RBP15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 ZBTB43O43298 467 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 ATF2P15336 505 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 GNA11P29992 359 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 CDC27P30260 824 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 QARSP47897 775 aaKnown RBP15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 EPHA5P54756 1037 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 POU5F1BQ06416 359 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 TEAD2Q15562 447 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 UAP1L1Q3KQV9 507 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 Q4G0T1 1027 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 CCDC12Q8WUD4 166 aaPredicted RBP15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 CYP4F11Q9HBI6 524 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 CEP72Q9P209 647 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 KIF26AQ9ULI4 1882 aaPredicted RBP15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 ATG2BQ96BY7 2078 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 ABCA7Q8IZY2 2146 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 APC2O95996 2303 aa15.37■□□□□ 0.05
NKX3-1-202ENST00000523261 ARID2Q68CP9 1835 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 EIF4E1BA6NMX2 242 aaKnown RBP15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 PATE3B3GLJ2 98 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 MYL4P12829 197 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 MXD4Q14582 209 aaPredicted RBP15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 CD300LGQ6UXG3 332 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 LEMD2Q8NC56 503 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 GLIS3Q8NEA6 775 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 SHKBP1Q8TBC3 707 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 ETNPPLQ8TBG4 499 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 ZFYVE19Q96K21 471 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 LRRC3BQ96PB8 259 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 GPR88Q9GZN0 384 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 XPNPEP1Q9NQW7 623 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 POLR3BQ9NW08 1133 aaPredicted RBP15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 ASXL3Q9C0F0 2248 aa15.36■□□□□ 0.05
NKX3-1-202ENST00000523261 SPAARA0A1B0GVQ0 90 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 GOLGA8AA7E2F4 631 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 GOLGA8BA8MQT2 603 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 I3L4J1 428 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 ATG13O75143 517 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 B3GAT3O94766 335 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 IRX4P78413 519 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 CAPSQ13938 189 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 KARSQ15046 597 aaKnown RBP15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 IQCEQ6IPM2 695 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 ELMOD1Q8N336 334 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 BICD2Q8TD16 824 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 ZNF512Q96ME7 567 aaPredicted RBP15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 HHIPQ96QV1 700 aa15.35■□□□□ 0.05
NKX3-1-202ENST00000523261 TMEM209Q96SK2 561 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms