RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 TGFBRAP1Q8WUH2 860 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 LARP4BQ92615 738 aaKnown RBP12.14□□□□□ -0.47
U2AF1-209ENST00000475639 TLR2O60603 784 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 AP1B1Q10567 949 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 LRRC14Q15048 493 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ARHGEF6Q15052 776 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 KIAA0825Q8IV33 1275 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 LRRC59Q96AG4 307 aaKnown RBP12.14□□□□□ -0.47
U2AF1-209ENST00000475639 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
U2AF1-209ENST00000475639 RGPD8O14715 1765 aaPredicted RBP12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ZBTB48P10074 688 aaPredicted RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 GAP43P17677 238 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 GSTT1P30711 240 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 AP2B1P63010 937 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 MECOMQ03112 1051 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 KCNA1Q09470 495 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 GJC2Q5T442 439 aaPredicted RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 FRA10AC1Q70Z53 315 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 ENDOVQ8N8Q3 282 aaKnown RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 RNF26Q9BY78 433 aaPredicted RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 MAGEB5Q9BZ81 275 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 NDE1Q9NXR1 346 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 PRKAG3Q9UGI9 489 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 SIPA1L3O60292 1781 aaPredicted RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 CHD4Q14839 1912 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 O00370 1275 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 HAUS5O94927 633 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 SCG2P13521 617 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 SKIV2L2P42285 1042 aaKnown RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 STK4Q13043 487 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 TFDP2Q14188 446 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 ADCK1Q86TW2 530 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 LRRC15Q8TF66 581 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 ARL2BPQ9Y2Y0 163 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 KRT75O95678 551 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 AFPP02771 609 aaKnown RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 UBE3AQ05086 875 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 SLC9A5Q14940 896 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 ELMSAN1Q6PJG2 1045 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 FAM13CQ8NE31 585 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 TRIM8Q9BZR9 551 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 ASCC2Q9H1I8 757 aaPredicted RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 ATXN10Q9UBB4 475 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 SIGLEC16A6NMB1 481 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 PP2D1A8MPX8 630 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 PODXLO00592 558 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 DDX5P17844 614 aaKnown RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 TMED10P49755 219 aaKnown RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 SPDYCQ5MJ68 293 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 ICA1LQ8NDH6 482 aa12.13□□□□□ -0.47
U2AF1-209ENST00000475639 PABPC3Q9H361 631 aaKnown RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
U2AF1-209ENST00000475639 H0YIN7 160 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
U2AF1-209ENST00000475639 S100A5P33763 92 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 USP11P51784 963 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 DEFA1P59665 94 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 DEFA3P59666 94 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 TFAMQ00059 246 aaKnown RBP12.12□□□□□ -0.47
U2AF1-209ENST00000475639 EFTUD2Q15029 972 aaKnown RBP eCLIP12.12□□□□□ -0.472e-7■■■■■ 46.8
U2AF1-209ENST00000475639 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
U2AF1-209ENST00000475639 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
U2AF1-209ENST00000475639 GPBP1L1Q9HC44 474 aaPredicted RBP12.12□□□□□ -0.47
U2AF1-209ENST00000475639 NMRK1Q9NWW6 199 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 ADA2Q9NZK5 511 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 CTNNAL1Q9UBT7 734 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 NXF1Q9UBU9 619 aaKnown RBP12.12□□□□□ -0.47
U2AF1-209ENST00000475639 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 LRRN2O75325 713 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
U2AF1-209ENST00000475639 PPP6R3Q5H9R7 873 aaPredicted RBP12.12□□□□□ -0.47
U2AF1-209ENST00000475639 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 SPATA5Q8NB90 893 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 ZNF510Q9Y2H8 683 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 ATRNO75882 1429 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 A0A087X0T9 212 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 MYO1DO94832 1006 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 AGTP01019 485 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 FAM228BP0C875 321 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 SRGAP2CP0DJJ0 459 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 FCER1AP12319 257 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 RASA1P20936 1047 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 IL10P22301 178 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 SERPINB4P48594 390 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 MXI1P50539 228 aa12.12□□□□□ -0.47
U2AF1-209ENST00000475639 ARL4CP56559 192 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms