RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PTPRJQ12913 1337 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 ADGRA2Q96PE1 1338 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 CNTNAP2Q9UHC6 1331 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 OGTO15294 1046 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 GRIN3BO60391 1043 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 ARIH2O95376 493 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 KRT14P02533 472 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 CYP1A1P04798 512 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 EDN1P05305 212 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 PGK2P07205 417 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 SRGAP2CP0DJJ0 459 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 PYGMP11217 842 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 GNA15P30679 374 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 SLC1A1P43005 524 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 PTGIRP43119 386 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 SKOR1P84550 965 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 CENPCQ03188 943 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 DHX9Q08211 1270 aaKnown RBP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 GRM1Q13255 1194 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 PLCB4Q15147 1175 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 MAPK6Q16659 721 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 DUPD1Q68J44 220 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 CDCA2Q69YH5 1023 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 TMEM270Q6UE05 265 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 LRRC31Q6UY01 552 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 RUFY4Q6ZNE9 571 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 PLPPR4Q7Z2D5 763 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 FBXO16Q8IX29 292 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 ABRAQ8N0Z2 381 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 RNF149Q8NC42 400 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 C1orf131Q8NDD1 294 aaKnown RBP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 ATP8B4Q8TF62 1192 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 PRPF31Q8WWY3 499 aaKnown RBP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 CPA5Q8WXQ8 436 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 SEC14L1Q92503 715 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 OPTNQ96CV9 577 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 ATP6V1G3Q96LB4 118 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 FMO2Q99518 471 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 ERP44Q9BS26 406 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 CCDC113Q9H0I3 377 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 MROH8Q9H579 483 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 APOBEC3GQ9HC16 384 aaKnown RBP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 TMBIM4Q9HC24 238 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 SPON1Q9HCB6 807 aa11.14□□□□□ -0.63
CPNE1-218ENST00000439806 MTRF1LQ9UGC7 380 aaKnown RBP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPNE1-218ENST00000439806 PASKQ96RG2 1323 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 MGAMO43451 1857 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 LOC102724159A0A0B4J2E5 919 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 MYO1FO00160 1098 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 PODXLO00592 558 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 SOCS7O14512 581 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 SHOX2O60902 331 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-218ENST00000439806 TOM1L1O75674 476 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 MYZAPP0CAP1 466 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 ACO1P21399 889 aaKnown RBP11.13□□□□□ -0.63
CPNE1-218ENST00000439806 RRM1P23921 792 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-218ENST00000439806 TNFSF9P41273 254 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 FNTAP49354 379 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 LAMTOR4Q0VGL1 99 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 DRP2Q13474 957 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 TRPC3Q13507 836 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 PWP2Q15269 919 aaKnown RBP11.13□□□□□ -0.63
CPNE1-218ENST00000439806 CYP1B1Q16678 543 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 SEZ6Q53EL9 994 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 DNAJC21Q5F1R6 531 aaKnown RBP11.13□□□□□ -0.63
CPNE1-218ENST00000439806 SPDYCQ5MJ68 293 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 KCTD16Q68DU8 428 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 CCDC137Q6PK04 289 aaKnown RBP11.13□□□□□ -0.63
CPNE1-218ENST00000439806 KDM7AQ6ZMT4 941 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 MOB2Q70IA6 237 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 TMC3Q7Z5M5 1100 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 PHLDB2Q86SQ0 1253 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 CPNE8Q86YQ8 564 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 CCDC105Q8IYK2 499 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 LRRC71Q8N4P6 559 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 SH2D3CQ8N5H7 860 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 ARFGAP2Q8N6H7 521 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 PRELID2Q8N945 189 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 OR5B17Q8NGF7 314 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 C18orf8Q96DM3 657 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 CYFIP2Q96F07 1278 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 FGD4Q96M96 766 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 ACO2Q99798 780 aaKnown RBP11.13□□□□□ -0.63
CPNE1-218ENST00000439806 C11orf70Q9BRQ4 267 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 CENPHQ9H3R5 247 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 SMARCAD1Q9H4L7 1026 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 MRPL47Q9HD33 250 aaKnown RBP11.13□□□□□ -0.63
CPNE1-218ENST00000439806 RBPJLQ9UBG7 517 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 PCYOX1Q9UHG3 505 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 SNX24Q9Y343 169 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 SCINQ9Y6U3 715 aa11.13□□□□□ -0.63
CPNE1-218ENST00000439806 UMODL1Q5DID0 1318 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 MROH7Q68CQ1 1323 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 DNAJC25-GNG10A0A024R161 153 aa11.12□□□□□ -0.63
CPNE1-218ENST00000439806 ASB14A6NK59 587 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms