RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CREB3O43889 395 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 PAPOLAP51003 745 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 SEC24CP53992 1094 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 NOP14P78316 857 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 ROR1Q01973 937 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 DUOXA2Q1HG44 320 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 NBPF20Q3BBV1 942 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 TTI2Q6NXR4 508 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 CYFIP1Q7L576 1253 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 RTKN2Q8IZC4 609 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 DCLK2Q8N568 766 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 KCNV2Q8TDN2 545 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 IL17RAQ96F46 866 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 NLRP4Q96MN2 994 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 FAM167BQ9BTA0 163 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 RANBP17Q9H2T7 1088 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 CXorf56Q9H5V9 222 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 ZNF408Q9H9D4 720 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 KLHL8Q9P2G9 620 aaPredicted RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 PCDHA10Q9Y5I2 948 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 YDJCA8MPS7 323 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 SPAG6O75602 509 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 PGM1P36871 562 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 FAM47CQ5HY64 1035 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 LRRC31Q6UY01 552 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 C16orf86Q6ZW13 317 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 HIPK4Q8NE63 616 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 GIPC2Q8TF65 315 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 DCPSQ96C86 337 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 MTRQ99707 1265 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 PABPC3Q9H361 631 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 TOPORSQ9NS56 1045 aaPredicted RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 RGL1Q9NZL6 768 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 SUN2Q9UH99 717 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 NAGPAQ9UK23 515 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 CPSF3Q9UKF6 684 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 AGO2Q9UKV8 859 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 RAD17O75943 681 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 RASA1P20936 1047 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 EEF1B2P24534 225 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 HNRNPH1P31943 449 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 FNTAP49354 379 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 EPHB1P54762 984 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 KLC1Q07866 573 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 DNAL1Q4LDG9 190 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 HEATR6Q6AI08 1181 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 MIGA2Q7L4E1 593 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 FBXO33Q7Z6M2 555 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 CATSPER1Q8NEC5 780 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 FAM193BQ96PV7 902 aaPredicted RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 VPS11Q9H270 941 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 RBAKQ9NYW8 714 aaPredicted RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 ECE2O60344 883 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 OSBPP22059 807 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 HSD17B3P37058 310 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 PHKA2P46019 1235 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 GPC3P51654 580 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 EFNA5P52803 228 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 CACNB3P54284 484 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 MORF4L2Q15014 288 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 OR6B3Q8NGW1 331 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 MYCBPAPQ8TBZ2 947 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 SERPINB12Q96P63 405 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 MRPL4Q9BYD3 311 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 TDRD3Q9H7E2 651 aaKnown RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 HOXC10Q9NYD6 342 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 HSPBP1Q9NZL4 362 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 PSMC3IPQ9P2W1 217 aaPredicted RBP8.86□□□□□ -0.99
VPS36-201ENST00000378060 GABBR1Q9UBS5 961 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 PCSK1NQ9UHG2 260 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 STAP1Q9ULZ2 295 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 PCDHB2Q9Y5E7 798 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 PCDHAC2Q9Y5I4 1007 aa8.86□□□□□ -0.99
VPS36-201ENST00000378060 SPDYE16A6NNV3 312 aaPredicted RBP8.85□□□□□ -0.99
VPS36-201ENST00000378060 ABL1P00519 1130 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 TOB1P50616 345 aaPredicted RBP8.85□□□□□ -0.99
VPS36-201ENST00000378060 ZNF568Q3ZCX4 644 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 SPDYE2Q495Y8 402 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 CENPPQ6IPU0 288 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 ADGRA1Q86SQ6 560 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 DPP9Q86TI2 863 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 TEX9Q8N6V9 391 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 SMYD3Q9H7B4 428 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 ARFGEF1Q9Y6D6 1849 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 TMEM120BA0PK00 339 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 DIAPH2O60879 1101 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 PDHBP11177 359 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 NPEPPSP55786 919 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 CENPCQ03188 943 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 NT5DC1Q5TFE4 455 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 TRIM65Q6PJ69 517 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 ICA1LQ8NDH6 482 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 OR2W6PQ8NHA6 318 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 TPCN2Q8NHX9 752 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 ZNF384Q8TF68 577 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 SLC40A1Q9NP59 571 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 RNF146Q9NTX7 359 aa8.85□□□□□ -0.99
VPS36-201ENST00000378060 A0A087X0T9 212 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms