RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.98□□□□□ -0.976e-7■■□□□ 14
PTPRK-206ENST00000368215 KRT35Q92764 455 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 PRMT1Q99873 361 aaKnown RBP8.98□□□□□ -0.97
PTPRK-206ENST00000368215 NUP188Q5SRE5 1749 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 LAMB4A4D0S4 1761 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 PIK3CDO00329 1044 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 CSDE1O75534 798 aaKnown RBP8.98□□□□□ -0.97
PTPRK-206ENST00000368215 SYF2O95926 243 aaKnown RBP8.98□□□□□ -0.97
PTPRK-206ENST00000368215 ZBED1O96006 694 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 MT-ND3P03897 115 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 IRX4P78413 519 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 CYP24A1Q07973 514 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 P3H1Q32P28 736 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 ZCWPW2Q504Y3 356 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 C1orf131Q8NDD1 294 aaKnown RBP8.98□□□□□ -0.97
PTPRK-206ENST00000368215 CCHCR1Q8TD31 782 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 STMN2Q93045 179 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 ZBTB45Q96K62 511 aaPredicted RBP8.98□□□□□ -0.97
PTPRK-206ENST00000368215 PITPNM3Q9BZ71 974 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 SNX25Q9H3E2 840 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 ROBO1Q9Y6N7 1651 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 GRAP2O75791 330 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 KRT3P12035 628 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 EFNA5P52803 228 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 ITGA8P53708 1063 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 SNCBQ16143 134 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 FBXW10Q5XX13 1052 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 GPAT2Q6NUI2 795 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 ZNF449Q6P9G9 518 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 BTNL9Q6UXG8 535 aa8.98□□□□□ -0.97
PTPRK-206ENST00000368215 EPM2AIP1Q7L775 607 aaPredicted RBP8.98□□□□□ -0.97
PTPRK-206ENST00000368215 NOP9Q86U38 636 aaKnown RBP8.98□□□□□ -0.97
PTPRK-206ENST00000368215 RSRC1Q96IZ7 334 aaKnown RBP8.98□□□□□ -0.97
PTPRK-206ENST00000368215 A0A0A6YYK5 440 aaPredicted RBP8.97□□□□□ -0.97
PTPRK-206ENST00000368215 RGS7P49802 495 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 CNTN2Q02246 1040 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 FAF2Q96CS3 445 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 MTMR12Q9C0I1 747 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 C2orf40Q9H1Z8 148 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 SLC38A10Q9HBR0 1119 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 NUP98P52948 1817 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 ADRB2P07550 413 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 KRT10P13645 584 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 ARL1P40616 181 aaPredicted RBP8.97□□□□□ -0.97
PTPRK-206ENST00000368215 SLC1A1P43005 524 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 TMEM62Q0P6H9 643 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 CUL2Q13617 745 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 PARD3BQ8TEW8 1205 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 PRPF31Q8WWY3 499 aaKnown RBP8.97□□□□□ -0.97
PTPRK-206ENST00000368215 CAVIN3Q969G5 261 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 HVCN1Q96D96 273 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 RBM15Q96T37 977 aaKnown RBP eCLIP8.97□□□□□ -0.971e-15■□□□□ 9.9
PTPRK-206ENST00000368215 SENP7Q9BQF6 1050 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 AGAP1Q9UPQ3 857 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 CAND2O75155 1236 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 CPP00450 1065 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 SUPT20HL2P0C7V6 817 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 PYGMP11217 842 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 PRKCIP41743 596 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 NFX1Q12986 1120 aaKnown RBP8.97□□□□□ -0.97
PTPRK-206ENST00000368215 PTGISQ16647 500 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 UGCGQ16739 394 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 C1orf228Q6PIY5 440 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 EPS8L3Q8TE67 593 aaKnown RBP8.97□□□□□ -0.97
PTPRK-206ENST00000368215 STRIP2Q9ULQ0 834 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 NUB1Q9Y5A7 615 aa8.97□□□□□ -0.97
PTPRK-206ENST00000368215 MEFVO15553 781 aaPredicted RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 RPSAP08865 295 aaKnown RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 RPS12P25398 132 aaKnown RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 PCK1P35558 622 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 CDH6P55285 790 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 ARL4CP56559 192 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 SESN3P58005 492 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 SARNPP82979 210 aaKnown RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 ITGB3BPQ13352 177 aaPredicted RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 XRRA1Q6P2D8 792 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 ZNF662Q6ZS27 426 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 RDM1Q8NG50 284 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 SLC5A4Q9NY91 659 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 PKD1L3Q7Z443 1732 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 TCP11X1B4DZS4 312 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 GOLGA8RI6L899 631 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 GJB6O95452 261 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 MARCKSL1P49006 195 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 CLCN3P51790 818 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 CLNS1AP54105 237 aaKnown RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 SNRPFP62306 86 aaKnown RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 JAG1P78504 1218 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 KIF12Q96FN5 646 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 XPO6Q96QU8 1125 aaKnown RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 TRAIPQ9BWF2 469 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 SEMA4AQ9H3S1 761 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 C17orf75Q9HAS0 396 aa8.96□□□□□ -0.97
PTPRK-206ENST00000368215 ALG13Q9NP73 1137 aaKnown RBP8.96□□□□□ -0.97
PTPRK-206ENST00000368215 RASSF10A6NK89 507 aa8.96□□□□□ -0.98
PTPRK-206ENST00000368215 GZMAP12544 262 aa8.96□□□□□ -0.98
PTPRK-206ENST00000368215 NLRP11P59045 1033 aaKnown RBP8.96□□□□□ -0.98
PTPRK-206ENST00000368215 PDE1BQ01064 536 aa8.96□□□□□ -0.98
PTPRK-206ENST00000368215 CAV1Q03135 178 aa8.96□□□□□ -0.98
PTPRK-206ENST00000368215 TTC17Q96AE7 1141 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms