RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 CCDC169A6NNP5 214 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 LRRN2O75325 713 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 PAPLNO95428 1278 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 C1RP00736 705 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 SPATA31D3P0C874 917 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 GLULP15104 373 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 GJB2P29033 226 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 NPTX2P47972 431 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 ATP2C1P98194 919 aaPredicted RBP16.05■□□□□ 0.16
SRRT-219ENST00000641476 ZNF568Q3ZCX4 644 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 DCLRE1AQ6PJP8 1040 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 CYP26C1Q6V0L0 522 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 SPATA31D4Q6ZUB0 917 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 GET4Q7L5D6 327 aaPredicted RBP16.05■□□□□ 0.16
SRRT-219ENST00000641476 TAS1R3Q7RTX0 852 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 CEP120Q8N960 986 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 PJA1Q8NG27 643 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 PIK3R5Q8WYR1 880 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 SMG7Q92540 1137 aaKnown RBP16.05■□□□□ 0.16
SRRT-219ENST00000641476 DRC1Q96MC2 740 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 TTPALQ9BTX7 342 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 CDT1Q9H211 546 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 PLEKHA4Q9H4M7 779 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 ZDHHC7Q9NXF8 308 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 ARHGAP28Q9P2N2 729 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 TNFSF13BQ9Y275 285 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 CITO14578 2027 aa16.05■□□□□ 0.16
SRRT-219ENST00000641476 PDCD11Q14690 1871 aaKnown RBP16.05■□□□□ 0.16
SRRT-219ENST00000641476 PSMD5Q16401 504 aa16.04■□□□□ 0.16
SRRT-219ENST00000641476 FAM171A1Q5VUB5 890 aa16.04■□□□□ 0.16
SRRT-219ENST00000641476 RINT1Q6NUQ1 792 aa16.04■□□□□ 0.16
SRRT-219ENST00000641476 APBB1IPQ7Z5R6 666 aaPredicted RBP16.04■□□□□ 0.16
SRRT-219ENST00000641476 NXPE3Q969Y0 559 aa16.04■□□□□ 0.16
SRRT-219ENST00000641476 PPP1R10Q96QC0 940 aaKnown RBP16.04■□□□□ 0.16
SRRT-219ENST00000641476 PIDD1Q9HB75 910 aa16.04■□□□□ 0.16
SRRT-219ENST00000641476 FBXW11Q9UKB1 542 aa16.04■□□□□ 0.16
SRRT-219ENST00000641476 NUMBLQ9Y6R0 609 aa16.04■□□□□ 0.16
SRRT-219ENST00000641476 GPR179Q6PRD1 2367 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 H3BQV1 296 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 TMEM189-UBE2V1I3L0A0 370 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 K7ERI5 159 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 LAMP2P13473 410 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 GRM5P41594 1212 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 ELAVL2Q12926 359 aaKnown RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 VARS2Q5ST30 1063 aaKnown RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 HYIQ5T013 277 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 LILRA6Q6PI73 481 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 C1orf186Q6ZWK4 172 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 CEP57Q86XR8 500 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 MAML2Q8IZL2 1156 aaPredicted RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 ACO2Q99798 780 aaKnown RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 TMEM134Q9H6X4 195 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 UPF2Q9HAU5 1272 aaKnown RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 GOLGA2P5Q9HBQ8 144 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 KMT5AQ9NQR1 393 aa16.03■□□□□ 0.16
SRRT-219ENST00000641476 DAXXQ9UER7 740 aaPredicted RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 KMT2BQ9UMN6 2715 aaPredicted RBP16.03■□□□□ 0.16
SRRT-219ENST00000641476 VWA3AA6NCI4 1184 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 GUCY2CP25092 1073 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 ATXN1P54253 815 aaKnown RBP16.02■□□□□ 0.16
SRRT-219ENST00000641476 HTR4Q13639 388 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.02■□□□□ 0.16
SRRT-219ENST00000641476 LNX1Q8TBB1 728 aaPredicted RBP16.02■□□□□ 0.16
SRRT-219ENST00000641476 PNMA5Q96PV4 448 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 CLSTN3Q9BQT9 956 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 TIPINQ9BVW5 301 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 CCDC94Q9BW85 323 aaPredicted RBP16.02■□□□□ 0.16
SRRT-219ENST00000641476 TARS2Q9BW92 718 aaKnown RBP16.02■□□□□ 0.16
SRRT-219ENST00000641476 NT5C3AQ9H0P0 336 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 C17orf75Q9HAS0 396 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 PTPRHQ9HD43 1115 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 SLC2A4RGQ9NR83 387 aa16.02■□□□□ 0.16
SRRT-219ENST00000641476 SPATA6Q9NWH7 488 aaPredicted RBP16.02■□□□□ 0.16
SRRT-219ENST00000641476 TPRP12270 2363 aaKnown RBP16.01■□□□□ 0.15
SRRT-219ENST00000641476 ABLIM1O14639 778 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 SLC16A4O15374 487 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 ADAM12O43184 909 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 ZMYND10O75800 440 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 SDHBP21912 280 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 PROZP22891 400 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 IGFBP6P24592 240 aaPredicted RBP16.01■□□□□ 0.15
SRRT-219ENST00000641476 CLCNKBP51801 687 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 OSTNP61366 133 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 RAD51AP2Q09MP3 1159 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 TMEM119Q4V9L6 283 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 LIN9Q5TKA1 542 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 PDXDC1Q6P996 788 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 MPZL3Q6UWV2 235 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 C3orf58Q8NDZ4 430 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 UROC1Q96N76 676 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 TBC1D32Q96NH3 1257 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 BCO2Q9BYV7 579 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 PRKD2Q9BZL6 878 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 TOPORSQ9NS56 1045 aaPredicted RBP16.01■□□□□ 0.15
SRRT-219ENST00000641476 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.15
SRRT-219ENST00000641476 CDV3Q9UKY7 258 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms