RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 LSMEM1Q8N8F7 131 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 CALML6Q8TD86 181 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 IPO4Q8TEX9 1081 aaKnown RBP6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 NUP133Q8WUM0 1156 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 HTRA1Q92743 480 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 RILPL2Q969X0 211 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 MAELQ96JY0 434 aaKnown RBP6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 PDCD2LQ9BRP1 358 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 KATNAL1Q9BW62 490 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 AP5M1Q9H0R1 490 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 ALDH8A1Q9H2A2 487 aaPredicted RBP6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 DHX36Q9H2U1 1008 aaKnown RBP6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 MRPL46Q9H2W6 279 aaKnown RBP6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 SARS2Q9NP81 518 aaKnown RBP6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 PCDHA1Q9Y5I3 950 aa6.11□□□□□ -1.43
TM9SF3-202ENST00000443638 THAP12O43422 761 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 TNFRSF6BO95407 300 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 PROCP04070 461 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 A1BGP04217 495 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 RPN1P04843 607 aaKnown RBP6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 ITGB2P05107 769 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 IL1R1P14778 569 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 GABRB3P28472 473 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 PRDX5P30044 214 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 ADD2P35612 726 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 AFMP43652 599 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 MAN2A2P49641 1150 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 TERF1P54274 439 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 NRG3P56975 720 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 ATP8B2P98198 1209 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 KHDC1LQ5JSQ8 128 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 CCDC30Q5VVM6 783 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 SULT6B1Q6IMI4 303 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 BORAQ6PGQ7 559 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 PROSER1Q86XN7 944 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 BRIX1Q8TDN6 353 aaKnown RBP6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 HIST1H2AHQ96KK5 128 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 NACC1Q96RE7 527 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 HIST1H2AJQ99878 128 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 MANSC1Q9H8J5 431 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 JMJD4Q9H9V9 463 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 INCENPQ9NQS7 918 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 CNNM1Q9NRU3 951 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 SACM1LQ9NTJ5 587 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 ANKEF1Q9NU02 776 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 FEM1BQ9UK73 627 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 FBXO10Q9UK96 956 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 MED16Q9Y2X0 877 aa6.1□□□□□ -1.43
TM9SF3-202ENST00000443638 RPTORQ8N122 1335 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 PODXLO00592 558 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 PLOD3O60568 738 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 EFEMP2O95967 443 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 LRG1P02750 347 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 AMY1AP04745 511 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 ZGLP1P0C6A0 271 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 MYL4P12829 197 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 XBP1P17861 261 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 XPAP23025 273 aaPredicted RBP6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 APEX1P27695 318 aaKnown RBP6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 CST5P28325 142 aaPredicted RBP6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 HOXD12P35452 270 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 PNLIPRP1P54315 467 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 VAMP2P63027 116 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 MGAT5Q09328 741 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 NFATC3Q12968 1075 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 GRM1Q13255 1194 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 KIR3DS1Q14943 382 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 ZNF827Q17R98 1081 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 TIGD6Q17RP2 521 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 FLYWCH1Q4VC44 716 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 SPECC1Q5M775 1068 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 FAM26FQ5R3K3 315 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 ITPRIPL1Q6GPH6 555 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 GALNT18Q6P9A2 607 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 ARHGAP27Q6ZUM4 889 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 MILR1Q7Z6M3 343 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 TXNRD3Q86VQ6 643 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 FAM129CQ86XR2 697 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 FTSJ3Q8IY81 847 aaKnown RBP6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 TSPYL6Q8N831 410 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 VGLL2Q8N8G2 317 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 GLIS1Q8NBF1 620 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 OR5AN1Q8NGI8 311 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 NELL1Q92832 810 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 AGXT2Q9BYV1 514 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 OSBPL6Q9BZF3 934 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 SENP6Q9GZR1 1112 aaPredicted RBP6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 SLC39A2Q9NP94 309 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 TMEM160Q9NX00 188 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 GALNT8Q9NY28 637 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 KIF17Q9P2E2 1029 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 SCAF8Q9UPN6 1271 aaKnown RBP6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 TAF6LQ9Y6J9 622 aa6.09□□□□□ -1.43
TM9SF3-202ENST00000443638 RPGRIP1LQ68CZ1 1315 aa6.08□□□□□ -1.44
TM9SF3-202ENST00000443638 TMEM265A0A087WTH1 108 aa6.08□□□□□ -1.44
TM9SF3-202ENST00000443638 A0A087WZ62 844 aa6.08□□□□□ -1.44
TM9SF3-202ENST00000443638 ZNF839A8K0R7 811 aa6.08□□□□□ -1.44
TM9SF3-202ENST00000443638 AKR1B10O60218 316 aa6.08□□□□□ -1.44
TM9SF3-202ENST00000443638 NDST3O95803 873 aa6.08□□□□□ -1.44
TM9SF3-202ENST00000443638 NCAM1P13591 858 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms