RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 RNF220Q5VTB9 566 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 OLFML1Q6UWY5 402 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 C16orf59Q7L2K0 433 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 OTOP1Q7RTM1 612 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CCDC186Q7Z3E2 898 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GPR155Q7Z3F1 870 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GALNTL5Q7Z4T8 443 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ZER1Q7Z7L7 766 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SLC9B2Q86UD5 537 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PEX5LQ8IYB4 626 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ZNF610Q8N9Z0 462 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ZNF540Q8NDQ6 660 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 MVB12AQ96EY5 273 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SH3GL1Q99961 368 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 BOCQ9BWV1 1114 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 LSM14BQ9BX40 385 aaKnown RBP6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 TRIM7Q9C029 511 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ZDHHC5Q9C0B5 715 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 VPS37BQ9H9H4 285 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CERS4Q9HA82 394 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CATSPERZQ9NTU4 200 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GPRC5BQ9NZH0 403 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ZNF624Q9P2J8 865 aaPredicted RBP6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 L1RE1Q9UN81 338 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ST14Q9Y5Y6 855 aa6.4□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 YEATS2Q9ULM3 1422 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 EVC2Q86UK5 1308 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 NEXMIFQ5QGS0 1516 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 TBKBP1A7MCY6 615 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 WNT9AO14904 365 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 HOXC11O43248 304 aaPredicted RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 AHCYL1O43865 530 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 KDM1AO60341 852 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 HSPA4LO95757 839 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 TNNT1P13805 278 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ABCB4P21439 1286 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 NPTX2P47972 431 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CENPAP49450 140 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SMAD3P84022 425 aaKnown RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 NCBP1Q09161 790 aaKnown RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 IDI1Q13907 227 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ARHGEF6Q15052 776 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PPP1R7Q15435 360 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SMAD2Q15796 467 aaKnown RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CRY1Q16526 586 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 WSCD2Q2TBF2 565 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 UAP1L1Q3KQV9 507 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 DGKKQ5KSL6 1271 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 EXOSC6Q5RKV6 272 aaKnown RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 FOXR1Q6PIV2 292 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 USP45Q70EL2 814 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 UBE3DQ7Z6J8 389 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 KRT78Q8N1N4 520 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 NPLOC4Q8TAT6 608 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SSH3Q8TE77 659 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SPATA17Q96L03 361 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 FBXL18Q96ME1 805 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 COG8Q96MW5 612 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GPATCH1Q9BRR8 931 aaKnown RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ASPNQ9BXN1 380 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 B3GNT5Q9BYG0 378 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 EIF2B4Q9UI10 523 aaKnown RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 TMEFF2Q9UIK5 374 aaPredicted RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 MRPL11Q9Y3B7 192 aaKnown RBP6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PLEKHH1Q9ULM0 1364 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ZNF521Q96K83 1311 aa6.39□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 C17orf113A0A1B0GUU1 675 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 POLR3GO15318 223 aaPredicted RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SGSM2O43147 1006 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 DGKIO75912 1065 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 UBXN7O94888 489 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PAHP00439 452 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PDCP20941 246 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 AGXTP21549 392 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 C5AR1P21730 350 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ELF1P32519 619 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 IKQ13123 557 aaPredicted RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SNW1Q13573 536 aaKnown RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SLC14A2Q15849 920 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 IMMTQ16891 758 aaKnown RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CCDC38Q502W7 563 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 E4F1Q66K89 784 aaPredicted RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 MCTP2Q6DN12 878 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 FRMD7Q6ZUT3 714 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 RALYLQ86SE5 291 aaKnown RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 C10orf67Q8IYJ2 551 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 THEMISQ8N1K5 641 aaPredicted RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 DHTKD1Q96HY7 919 aaPredicted RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ACAP3Q96P50 834 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 RBM14Q96PK6 669 aaKnown RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ASB2Q96Q27 587 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ORAI2Q96SN7 254 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SDF4Q9BRK5 362 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 MS4A5Q9H3V2 200 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 IPPKQ9H8X2 491 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 JPH1Q9HDC5 661 aaPredicted RBP6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ZNF446Q9NWS9 450 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GPR34Q9UPC5 381 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GPR45Q9Y5Y3 372 aa6.38□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 BACE2Q9Y5Z0 518 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms