RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 DDX12PQ92771 950 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 PANK2Q9BZ23 570 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 POMKQ9H5K3 350 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 GOLGA2P5Q9HBQ8 144 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 MAN1C1Q9NR34 630 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 CNTN3Q9P232 1028 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 CDH22Q9UJ99 828 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 TRIP11Q15643 1979 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 F13A1P00488 732 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 PIGRP01833 764 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 RPL17P18621 184 aaKnown RBP16.72■□□□□ 0.27
NUP50-204ENST00000417702 SP100P23497 879 aaPredicted RBP16.72■□□□□ 0.27
NUP50-204ENST00000417702 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
NUP50-204ENST00000417702 GTF2BQ00403 316 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 PSMD5Q16401 504 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 SEZ6Q53EL9 994 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 PRSS55Q6UWB4 352 aaPredicted RBP16.72■□□□□ 0.27
NUP50-204ENST00000417702 GPR149Q86SP6 731 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 GLYCTKQ8IVS8 523 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 HDAC7Q8WUI4 952 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 PIK3R5Q8WYR1 880 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 ZMAT2Q96NC0 199 aaKnown RBP16.72■□□□□ 0.27
NUP50-204ENST00000417702 LRFN3Q9BTN0 628 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 PLEKHA4Q9H4M7 779 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 PLEKHA5Q9HAU0 1116 aa16.72■□□□□ 0.27
NUP50-204ENST00000417702 CITO14578 2027 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 FAM86C2PA6NEL3 165 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 MYMKA6NI61 221 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 PODXLO00592 558 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 CXCL8P10145 99 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 GAP43P17677 238 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 RPL9P32969 192 aaKnown RBP16.71■□□□□ 0.27
NUP50-204ENST00000417702 SOX4Q06945 474 aaPredicted RBP16.71■□□□□ 0.27
NUP50-204ENST00000417702 SLC10A6Q3KNW5 377 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
NUP50-204ENST00000417702 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
NUP50-204ENST00000417702 C15orf39Q6ZRI6 1047 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 SFR1Q86XK3 245 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 MAP4K3Q8IVH8 894 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 PDILTQ8N807 584 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 CMASQ8NFW8 434 aaPredicted RBP16.71■□□□□ 0.27
NUP50-204ENST00000417702 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
NUP50-204ENST00000417702 FIZ1Q96SL8 496 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 MSTO1Q9BUK6 570 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 ST6GALNAC4Q9H4F1 302 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 SEL1LQ9UBV2 794 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 NUB1Q9Y5A7 615 aa16.71■□□□□ 0.27
NUP50-204ENST00000417702 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.71■□□□□ 0.27
NUP50-204ENST00000417702 OGTO15294 1046 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 TGM5O43548 720 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 CUTAO60888 179 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 SPATA31D3P0C874 917 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 MYBP10242 640 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 IDEP14735 1019 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 COL9A1P20849 921 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 FGFR3P22607 806 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 PPP2R3AQ06190 1150 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 ATL3Q6DD88 541 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 SLFN12LQ6IEE8 588 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 CYP26C1Q6V0L0 522 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 SPATA31D4Q6ZUB0 917 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 CCDC149Q6ZUS6 474 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 ZNF720Q7Z2F6 126 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 TDRD5Q8NAT2 981 aaKnown RBP16.7■□□□□ 0.26
NUP50-204ENST00000417702 KCNG4Q8TDN1 519 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 C18orf25Q96B23 403 aaPredicted RBP16.7■□□□□ 0.26
NUP50-204ENST00000417702 HVCN1Q96D96 273 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 HAPLN2Q9GZV7 340 aa16.7■□□□□ 0.26
NUP50-204ENST00000417702 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
NUP50-204ENST00000417702 RPF1Q9H9Y2 349 aaKnown RBP16.7■□□□□ 0.26
NUP50-204ENST00000417702 A0A087X0B3 334 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 A0A0B4J269 797 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 CCDC195A0A1B0GUA6 201 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 BRCC3P46736 316 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 ZC2HC1CQ53FD0 456 aaPredicted RBP16.69■□□□□ 0.26
NUP50-204ENST00000417702 LILRA6Q6PI73 481 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 CD300LGQ6UXG3 332 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 ANKS3Q6ZW76 656 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 KREMEN2Q8NCW0 462 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 C3orf58Q8NDZ4 430 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 DNAJC19Q96DA6 116 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 C11orf16Q9NQ32 467 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 ZDHHC7Q9NXF8 308 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 EXOC7Q9UPT5 735 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 USTQ9Y2C2 406 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 C5orf42Q9H799 3197 aa16.69■□□□□ 0.26
NUP50-204ENST00000417702 TTC26A0AVF1 554 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 PRR33A8MZF0 331 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 C2CD4DB7Z1M9 353 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 I3L4J1 428 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 MEFVO15553 781 aaPredicted RBP16.68■□□□□ 0.26
NUP50-204ENST00000417702 XPOTO43592 962 aaKnown RBP16.68■□□□□ 0.26
NUP50-204ENST00000417702 RFPL2O75678 378 aa16.68■□□□□ 0.26
NUP50-204ENST00000417702 IGFBP6P24592 240 aaPredicted RBP16.68■□□□□ 0.26
NUP50-204ENST00000417702 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
NUP50-204ENST00000417702 TNFSF9P41273 254 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms