RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 TBX20Q9UMR3 447 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 HCN4Q9Y3Q4 1203 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 VWA8A3KMH1 1905 aa23.29■■□□□ 1.32
UBE2D3-201ENST00000321805 TRIOO75962 3097 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 HNRNPDLO14979 420 aaKnown RBP23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 TGM5O43548 720 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 FGFR3P22607 806 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 RPL9P32969 192 aaKnown RBP23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 LIG4P49917 911 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 CEBPZQ03701 1054 aaKnown RBP23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 PSMD5Q16401 504 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 PTPN21Q16825 1174 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 SPECC1Q5M775 1068 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 LILRA6Q6PI73 481 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 CCDC73Q6ZRK6 1079 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 USP49Q70CQ1 688 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 ZDHHC14Q8IZN3 488 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 PLCD3Q8N3E9 789 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 TDRD5Q8NAT2 981 aaKnown RBP23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 LNX1Q8TBB1 728 aaPredicted RBP23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 ST6GALNAC4Q9H4F1 302 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 TSHZ2Q9NRE2 1034 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 C2orf16Q68DN1 1984 aa23.28■■□□□ 1.32
UBE2D3-201ENST00000321805 TECTAO75443 2155 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 CLTAP09496 248 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 WEE2P0C1S8 567 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 HARSP12081 509 aaKnown RBP23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 ZXDAP98168 799 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 GTF2BQ00403 316 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 RRAGBQ5VZM2 374 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 PRSS55Q6UWB4 352 aaPredicted RBP23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 ZNF396Q96N95 335 aaPredicted RBP23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 ZMAT2Q96NC0 199 aaKnown RBP23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 CLIC6Q96NY7 704 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 FIZ1Q96SL8 496 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 SEL1LQ9UBV2 794 aa23.27■■□□□ 1.32
UBE2D3-201ENST00000321805 C2CD4DB7Z1M9 353 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 HSP90AA1P07900 732 aaKnown RBP23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 MATR3P43243 847 aaKnown RBP eCLIP23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 SOX4Q06945 474 aaPredicted RBP23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 SLC10A6Q3KNW5 377 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 KANK3Q6NY19 840 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 CEP57Q86XR8 500 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 PALB2Q86YC2 1186 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 MAP4K3Q8IVH8 894 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 LINC00301Q8NCQ3 95 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 ACSF2Q96CM8 615 aaPredicted RBP23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 HVCN1Q96D96 273 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 TSPAN18Q96SJ8 248 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 ZHX3Q9H4I2 956 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 GOLGA2P5Q9HBQ8 144 aa23.26■■□□□ 1.31
UBE2D3-201ENST00000321805 CCDC195A0A1B0GUA6 201 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 PODXLO00592 558 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 PPP6R2O75170 966 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 STK38Q15208 465 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 CD300LGQ6UXG3 332 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 TRIM67Q6ZTA4 783 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 ANKS3Q6ZW76 656 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 SV2BQ7L1I2 683 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 OTOP3Q7RTS5 596 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 BMP8AQ7Z5Y6 402 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 KREMEN2Q8NCW0 462 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 STAMQ92783 540 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 CLSTN3Q9BQT9 956 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 FBXW11Q9UKB1 542 aa23.25■■□□□ 1.31
UBE2D3-201ENST00000321805 OGTO15294 1046 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 YEATS4O95619 227 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 GAP43P17677 238 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 RPL17P18621 184 aaKnown RBP23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 SP100P23497 879 aaPredicted RBP23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 C3orf58Q8NDZ4 430 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 DDX12PQ92771 950 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 HAPLN2Q9GZV7 340 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 WDR6Q9NNW5 1121 aaKnown RBP23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 MTRRQ9UBK8 725 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 SORCS3Q9UPU3 1222 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 BACE2Q9Y5Z0 518 aa23.24■■□□□ 1.31
UBE2D3-201ENST00000321805 TTC26A0AVF1 554 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 SYN3O14994 580 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 MEFVO15553 781 aaPredicted RBP23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 XPOTO43592 962 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 ZMYND10O75800 440 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 CXCL8P10145 99 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 HOXA9P31269 272 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 STAT6P42226 847 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 SIGLEC14Q08ET2 396 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 RAB33AQ14088 237 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 LIN9Q5TKA1 542 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 RTL10Q7L3V2 364 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 GLYCTKQ8IVS8 523 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 UBALD2Q8IYN6 164 aa23.23■■□□□ 1.31
UBE2D3-201ENST00000321805 A0A0B4J269 797 aa23.22■■□□□ 1.31
UBE2D3-201ENST00000321805 SPTLC2O15270 562 aa23.22■■□□□ 1.31
UBE2D3-201ENST00000321805 FAM189A1O60320 539 aa23.22■■□□□ 1.31
UBE2D3-201ENST00000321805 ADRB2P07550 413 aa23.22■■□□□ 1.31
UBE2D3-201ENST00000321805 HNRNPA1P09651 372 aaKnown RBP eCLIP23.22■■□□□ 1.31
UBE2D3-201ENST00000321805 CYP3A5P20815 502 aa23.22■■□□□ 1.31
UBE2D3-201ENST00000321805 PPP2R3AQ06190 1150 aa23.22■■□□□ 1.31
UBE2D3-201ENST00000321805 MTMR3Q13615 1198 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms