RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 YTHDC2Q9H6S0 1430 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MSH6P52701 1360 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CEP350Q5VT06 3117 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 OR6C65A6NJZ3 312 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 IFIT3O14879 490 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 HDAC3O15379 428 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 AKAP10O43572 662 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 LGR5O75473 907 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 EIF2S1P05198 315 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 GNAI3P08754 354 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MYBP10242 640 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 POU2F1P14859 743 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 GJB2P29033 226 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CBX5P45973 191 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 DIO1P49895 249 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 IRAK1P51617 712 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TKTL1P51854 596 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 RAB14P61106 215 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TMPRSS15P98073 1019 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT76Q01546 638 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 DSG2Q14126 1118 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MAPRE2Q15555 327 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SPDYAQ5MJ70 313 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KCTD16Q68DU8 428 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MIS18BP1Q6P0N0 1132 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 C11orf88Q6PI97 169 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CPLX4Q7Z7G2 160 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TTC6Q86TZ1 520 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 NLRP10Q86W26 655 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF527Q8NB42 609 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SHCBP1Q8NEM2 672 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 OR6P1Q8NGX9 317 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 METTL6Q8TCB7 284 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 FNIP1Q8TF40 1166 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 POF1BQ8WVV4 589 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 XAGE2Q96GT9 111 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CEP19Q96LK0 163 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 HS6ST2Q96MM7 605 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PRAM1Q96QH2 718 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TEX12Q9BXU0 123 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ABCB6Q9NP58 842 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SMYD2Q9NRG4 433 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SEMA3GQ9NS98 782 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 AMACRQ9UHK6 382 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TMX2Q9Y320 296 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 NEXMIFQ5QGS0 1516 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MYO1FO00160 1098 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 LIN7AO14910 233 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KPNA5O15131 536 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 EIF3HO15372 352 aaKnown RBP eCLIP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SORBS3O60504 671 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SEMA3DO95025 777 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ALAS1P13196 640 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 HOXB1P14653 301 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ATP5JP18859 108 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CHMLP26374 656 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PDHA2P29803 388 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 GALNSP34059 522 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 EIF4A1P60842 406 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 APBA1Q02410 837 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SQLEQ14534 574 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 NFE2Q16621 373 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 DEPDC1Q5TB30 811 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CYP4F22Q6NT55 531 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD44Q8N8A2 993 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 NSMCE1Q8WV22 266 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SMG7Q92540 1137 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 DPF3Q92784 378 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC35B4Q969S0 331 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PIGSQ96S52 555 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CNPY3Q9BT09 278 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TGIF2Q9GZN2 237 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PLEKHA4Q9H4M7 779 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 THAP9Q9H5L6 903 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 DMAP1Q9NPF5 467 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KCNQ5Q9NR82 932 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 GID8Q9NWU2 228 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 HSPBP1Q9NZL4 362 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PKD2L2Q9NZM6 624 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SCOCQ9UIL1 159 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CDC23Q9UJX2 597 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PNMA8BQ9ULN7 279 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MAD1L1Q9Y6D9 718 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CDC42BPGQ6DT37 1551 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TTC21AQ8NDW8 1320 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ADCY3O60266 1144 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MYBL1P10243 752 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 MYCLP12524 364 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ATP5F1P24539 256 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ARL1P40616 181 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 B2MP61769 119 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 RPP30P78346 268 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PRKG2Q13237 762 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 BMPR2Q13873 1038 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 DOC2AQ14183 400 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ZMYND11Q15326 602 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 INSCQ1MX18 579 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ARMC6Q6NXE6 501 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ALKBH5Q6P6C2 394 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC15A3Q8IY34 581 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms