RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ANKEF1Q9NU02 776 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 ANAPC7Q9UJX3 599 aa21.66■■□□□ 1.06
SHKBP1-225ENST00000600733 ADGRA3Q8IWK6 1321 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 TP73O15350 636 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 CYP24A1Q07973 514 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 DRP2Q13474 957 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 SLMAPQ14BN4 828 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 ANKRD20A8PQ5CZ79 823 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 C12orf50Q8NA57 414 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 SLC17A8Q8NDX2 589 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 KIFAP3Q92845 792 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 MFSD14AQ96MC6 490 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 TAOK3Q9H2K8 898 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 LRRC19Q9H756 370 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 PXMP2Q9NR77 195 aa21.65■■□□□ 1.06
SHKBP1-225ENST00000600733 ATP2C2O75185 946 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 AGTP01019 485 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 CLEC16AQ2KHT3 1053 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 CCDC38Q502W7 563 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 C2CD6Q53TS8 623 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 SGO2Q562F6 1265 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 CYFIP1Q7L576 1253 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 ATG4AQ8WYN0 398 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 DDX23Q9BUQ8 820 aaKnown RBP21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 MTFR1LQ9H019 292 aa21.64■■□□□ 1.06
SHKBP1-225ENST00000600733 WNT10BO00744 389 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 RASGRF2O14827 1237 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 SFNP31947 248 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 MNAT1P51948 309 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 KRT76Q01546 638 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 MAP3K10Q02779 954 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 KRT17Q04695 432 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 LLGL2Q6P1M3 1020 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 TMC2Q8TDI7 906 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 CCDC114Q96M63 670 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 FBXL18Q96ME1 805 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 JPH2Q9BR39 696 aaPredicted RBP21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 CCDC113Q9H0I3 377 aa21.64■■□□□ 1.05
SHKBP1-225ENST00000600733 HNRNPDLO14979 420 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 MAPK4P31152 587 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 CALCOCO2Q13137 446 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 AUHQ13825 339 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 PLCB4Q15147 1175 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 ARHGEF16Q5VV41 709 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 LPAR1Q92633 364 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 CEP170P1Q96L14 293 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 RUNDC3BQ96NL0 473 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 PRMT1Q99873 361 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 HERPUD2Q9BSE4 406 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 CHST7Q9NS84 486 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 INTS9Q9NV88 658 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 TELO2Q9Y4R8 837 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 WDR81Q562E7 1941 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 FSCN2O14926 492 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 ZNF862O60290 1169 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 DAB2IPQ5VWQ8 1189 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 CPA5Q8WXQ8 436 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 WNK4Q96J92 1243 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 FAM213AQ9BRX8 229 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 TMEM109Q9BVC6 243 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 AAASQ9NRG9 546 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 GABBR1Q9UBS5 961 aa21.63■■□□□ 1.05
SHKBP1-225ENST00000600733 ACSL3O95573 720 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 LONRF1Q17RB8 773 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 LMBRD2Q68DH5 695 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 HVCN1Q96D96 273 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 MOV10L1Q9BXT6 1211 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 CDC42EP4Q9H3Q1 356 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 ACTR5Q9H9F9 607 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 SLC40A1Q9NP59 571 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 RASSF9O75901 435 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 SCP2P22307 547 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 RRM1P23921 792 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 IFNAR2P48551 515 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 CCT6BQ92526 530 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 KIAA1683Q9H0B3 1180 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 ASIC3Q9UHC3 531 aa21.62■■□□□ 1.05
SHKBP1-225ENST00000600733 MROH7Q68CQ1 1323 aa21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 UNGP13051 313 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 CHKAP35790 457 aa21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 TRIP13Q15645 432 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 TNFAIP8L3Q5GJ75 292 aa21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 LRRC34Q8IZ02 419 aa21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 GPD1LQ8N335 351 aa21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 MTMR14Q8NCE2 650 aa21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 NTPCRQ9BSD7 190 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 RIPK3Q9Y572 518 aa21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 PCDHA10Q9Y5I2 948 aa21.61■■□□□ 1.05
SHKBP1-225ENST00000600733 GTF2H1P32780 548 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 SCTRP47872 440 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 SP4Q02446 784 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 MTMR2Q13614 643 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 ZNF568Q3ZCX4 644 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 RTKN2Q8IZC4 609 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 MCOLN2Q8IZK6 566 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 TTLL6Q8N841 843 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 SPIRE2Q8WWL2 714 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 ZNF516Q92618 1163 aa21.6■■□□□ 1.05
SHKBP1-225ENST00000600733 BICD1Q96G01 975 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms