RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 C12orf56Q8IXR9 622 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 FBXO22Q8NEZ5 403 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 POMGNT1Q8WZA1 660 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 LPPQ93052 612 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 CGNQ9P2M7 1197 aaKnown RBP20.56■□□□□ 0.88
CCDC9-205ENST00000600117 TRAF3IP3Q9Y228 551 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 OGTO15294 1046 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 STAG3L1P0CL83 205 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 MATR3P43243 847 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC9-205ENST00000600117 NLRP12P59046 1061 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 ZBTB41Q5SVQ8 909 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 CENPPQ6IPU0 288 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 HS2ST1Q7LGA3 356 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 TMEM192Q8IY95 271 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 RNF169Q8NCN4 708 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 ZSWIM2Q8NEG5 633 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 MRPL38Q96DV4 380 aaKnown RBP20.55■□□□□ 0.88
CCDC9-205ENST00000600117 MSTO1Q9BUK6 570 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 SNTG2Q9NY99 539 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 AGO2Q9UKV8 859 aaKnown RBP20.55■□□□□ 0.88
CCDC9-205ENST00000600117 INSL6Q9Y581 213 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 PCDHB7Q9Y5E2 793 aa20.55■□□□□ 0.88
CCDC9-205ENST00000600117 CLIC2O15247 247 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 MEFVO15553 781 aaPredicted RBP20.54■□□□□ 0.88
CCDC9-205ENST00000600117 UPP2O95045 317 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 FGFR1P11362 822 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 ITGA4P13612 1032 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 PPP1R2P41236 205 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 GATMP50440 423 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 PMS1P54277 932 aaKnown RBP20.54■□□□□ 0.88
CCDC9-205ENST00000600117 DPCR1Q3MIW9 517 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 SEZ6Q53EL9 994 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 CLLU1OSQ5K130 101 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 FAM117BQ6P1L5 589 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 ARMCX5Q6P1M9 558 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 THNSL1Q8IYQ7 743 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 GOLGA5Q8TBA6 731 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 PGBD4Q96DM1 585 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 DHTKD1Q96HY7 919 aaPredicted RBP20.54■□□□□ 0.88
CCDC9-205ENST00000600117 C17orf80Q9BSJ5 609 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 APOL6Q9BWW8 343 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 PCIF1Q9H4Z3 704 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 RC3H2Q9HBD1 1191 aaKnown RBP20.54■□□□□ 0.88
CCDC9-205ENST00000600117 PRKAG3Q9UGI9 489 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 LRFN2Q9ULH4 789 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 FAM50BQ9Y247 325 aa20.54■□□□□ 0.88
CCDC9-205ENST00000600117 H3BQ06 376 aaPredicted RBP20.53■□□□□ 0.88
CCDC9-205ENST00000600117 DGKIO75912 1065 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 RECQL4O94761 1208 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 AKAP5P24588 427 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 CCNE1P24864 410 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 TNFSF9P41273 254 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 HTRA4P83105 476 aaPredicted RBP20.53■□□□□ 0.88
CCDC9-205ENST00000600117 STIM1Q13586 685 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 PTPROQ16827 1216 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 CRELD2Q6UXH1 353 aaPredicted RBP20.53■□□□□ 0.88
CCDC9-205ENST00000600117 MLKLQ8NB16 471 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 TMEM174Q8WUU8 243 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 P2RX5Q93086 422 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 SAAL1Q96ER3 474 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 RSAD1Q9HA92 442 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 DMAC2Q9NW81 257 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 RNF216Q9NWF9 866 aaPredicted RBP20.53■□□□□ 0.88
CCDC9-205ENST00000600117 HSPBP1Q9NZL4 362 aa20.53■□□□□ 0.88
CCDC9-205ENST00000600117 CPSF3Q9UKF6 684 aaKnown RBP20.53■□□□□ 0.88
CCDC9-205ENST00000600117 ZDBF2Q9HCK1 2354 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 FNDC1Q4ZHG4 1894 aaPredicted RBP20.52■□□□□ 0.88
CCDC9-205ENST00000600117 PSMA7O14818 248 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 KIAA0391O15091 583 aaKnown RBP20.52■□□□□ 0.88
CCDC9-205ENST00000600117 INPPL1O15357 1258 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 OFD1O75665 1012 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 CLTAP09496 248 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 OSTNP61366 133 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 ZP2Q05996 745 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 NFIL3Q16649 462 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 TIGD5Q53EQ6 642 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 KLHL10Q6JEL2 608 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 SLC9A9Q8IVB4 645 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 HACE1Q8IYU2 909 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 ZNF689Q96CS4 500 aaPredicted RBP20.52■□□□□ 0.88
CCDC9-205ENST00000600117 CCDC94Q9BW85 323 aaPredicted RBP20.52■□□□□ 0.88
CCDC9-205ENST00000600117 CXCL16Q9H2A7 254 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 PARP2Q9UGN5 583 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 GIT1Q9Y2X7 761 aa20.52■□□□□ 0.88
CCDC9-205ENST00000600117 GOLGA8IPA6NC78 632 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 TRIM49BA6NDI0 452 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 C19orf67A6NJJ6 358 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 GOLGA8JA6NMD2 632 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 CALUO43852 315 aaPredicted RBP20.51■□□□□ 0.87
CCDC9-205ENST00000600117 EXTL3O43909 919 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 NR3C1P04150 777 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 ACOT2P49753 483 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 KYAT1Q16773 422 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 EDRF1Q3B7T1 1238 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 ANKRD40Q6AI12 368 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 TTI2Q6NXR4 508 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 SASS6Q6UVJ0 657 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 HELQQ8TDG4 1101 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 NELFBQ8WX92 580 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 PABPC5Q96DU9 382 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms