RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ABL1P00519 1130 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 OR6B3Q8NGW1 331 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 CEP95Q96GE4 821 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 MRPL4Q9BYD3 311 aaKnown RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 AGPAT5Q9NUQ2 364 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 PAK5Q9P286 719 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 UNC13BO14795 1591 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 GPC3P51654 580 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF200P98182 395 aaPredicted RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 QRICH1Q2TAL8 776 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 ZBTB33Q86T24 672 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 MRPL1Q9BYD6 325 aaKnown RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SFI1A8K8P3 1242 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SLC12A1Q13621 1099 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 STXBP2Q15833 593 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 CDO1Q16878 200 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SCARA5Q6ZMJ2 495 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 EIF1ADQ8N9N8 165 aaKnown RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 BEST2Q8NFU1 509 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 TSPAN17Q96FV3 270 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 FAM213AQ9BRX8 229 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 DCLRE1BQ9H816 532 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 CYP4F11Q9HBI6 524 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 GRID1Q9ULK0 1009 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 TRPC1P48995 793 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 EIF2AK1Q9BQI3 630 aaKnown RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 APOL1O14791 398 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 NPR1P16066 1061 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 EIF3EP60228 445 aaKnown RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 FLOT2Q14254 428 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SH3RF3Q8TEJ3 882 aaPredicted RBP11.32□□□□□ -0.6
SEC22B-201ENST00000578049 LZICQ8WZA0 190 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 MINPP1Q9UNW1 487 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 ABCC3O15438 1527 aa11.32□□□□□ -0.6
SEC22B-201ENST00000578049 SLC16A4O15374 487 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 C12orf60Q5U649 245 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 LXNQ9BS40 222 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 KCND1Q9NSA2 647 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L15C9J2P7 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L13C9JLJ4 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L11C9JVI0 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L18D6R9N7 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L22D6RA61 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L17D6RBQ6 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L19D6RCP7 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L20D6RJB6 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 TDP2O95551 362 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 SYF2O95926 243 aaKnown RBP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 APOA4P06727 396 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 RARGP13631 454 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 MAP4P27816 1152 aaKnown RBP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 HSD17B3P37058 310 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 MAGEA4P43358 317 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 CDH6P55285 790 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L24Q0WX57 530 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 STK4Q13043 487 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L6PQ6QN14 398 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 FRA10AC1Q70Z53 315 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 ABI1Q8IZP0 508 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 RYBPQ8N488 228 aaPredicted RBP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 PIGBQ92521 554 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 TRIM51Q9BSJ1 452 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 PP2D1A8MPX8 630 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 IGF2BP3O00425 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 HUS1O60921 280 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 SLC20A2Q08357 652 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 TRIP10Q15642 601 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 GADL1Q6ZQY3 521 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 DAGLBQ8NCG7 672 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 EME1Q96AY2 570 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 ULK4Q96C45 1275 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 PPME1Q9Y570 386 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 ANGPT2O15123 496 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 KDM1AO60341 852 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 MAPK7Q13164 816 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 TMEM259Q4ZIN3 620 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF746Q6NUN9 644 aaPredicted RBP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 ATG9AQ7Z3C6 839 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 RIN2Q8WYP3 895 aaPredicted RBP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 TRIM49P0CI25 452 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 TRIM49CP0CI26 452 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 COPB2P35606 906 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 DEFA1P59665 94 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 DEFA3P59666 94 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 SUGP1Q8IWZ8 645 aaKnown RBP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 THNSL1Q8IYQ7 743 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 SRBD1Q8N5C6 995 aaKnown RBP11.31□□□□□ -0.6
SEC22B-201ENST00000578049 ZC3H7BQ9UGR2 993 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms