RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 C12orf56Q8IXR9 622 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 GPD1LQ8N335 351 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 ERCC4Q92889 916 aaPredicted RBP17.4■□□□□ 0.38
SSBP1-214ENST00000498107 CBWD1Q9BRT8 395 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 ASB7Q9H672 318 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 NRDE2Q9H7Z3 1164 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 CERS4Q9HA82 394 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 MIOSQ9NXC5 875 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 HSPBP1Q9NZL4 362 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 STK39Q9UEW8 545 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 MAN1B1Q9UKM7 699 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 SZT2Q5T011 3432 aa17.4■□□□□ 0.38
SSBP1-214ENST00000498107 SMIM28A0A1B0GU29 152 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 TTC26A0AVF1 554 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 H3BNC9 293 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 PTGESO14684 152 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 IL18RAPO95256 599 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 ADRB2P07550 413 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 CXCL8P10145 99 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 TNFSF9P41273 254 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 ACOT2P49753 483 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 AFF1P51825 1210 aaKnown RBP17.39■□□□□ 0.37
SSBP1-214ENST00000498107 BCAR1P56945 870 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 KRT17Q04695 432 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 UBE3AQ05086 875 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 DSC1Q08554 894 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 TUSC3Q13454 348 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 GPM6BQ13491 265 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 MYBPC2Q14324 1141 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 GRIN2CQ14957 1233 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 ENOX2Q16206 610 aaKnown RBP17.39■□□□□ 0.37
SSBP1-214ENST00000498107 SLC10A6Q3KNW5 377 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 ZNF280BQ86YH2 543 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 COLGALT2Q8IYK4 626 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 XXYLT1Q8NBI6 393 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 GPT2Q8TD30 523 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 TMEM174Q8WUU8 243 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 UROC1Q96N76 676 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 PPP1R10Q96QC0 940 aaKnown RBP17.39■□□□□ 0.37
SSBP1-214ENST00000498107 GAS2L1Q99501 681 aaPredicted RBP17.39■□□□□ 0.37
SSBP1-214ENST00000498107 FAM213AQ9BRX8 229 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 IKZF4Q9H2S9 585 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 KCTD10Q9H3F6 313 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 SPG21Q9NZD8 308 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 PUF60Q9UHX1 559 aaKnown RBP17.39■□□□□ 0.37
SSBP1-214ENST00000498107 TRAF3IP3Q9Y228 551 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 FAN1Q9Y2M0 1017 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 KIAA1671Q9BY89 1806 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 TRIP11Q15643 1979 aa17.39■□□□□ 0.37
SSBP1-214ENST00000498107 ZNF233A6NK53 670 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 DDHD2O94830 711 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 GALTP07902 379 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 RPL13P26373 211 aaKnown RBP17.38■□□□□ 0.37
SSBP1-214ENST00000498107 PLCB3Q01970 1234 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 MORC3Q14149 939 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 SURF1Q15526 300 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 PTPROQ16827 1216 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 NT5DC4Q86YG4 428 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 SLC9A9Q8IVB4 645 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 NOC3LQ8WTT2 800 aaKnown RBP17.38■□□□□ 0.37
SSBP1-214ENST00000498107 SAAL1Q96ER3 474 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 FAM161BQ96MY7 647 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 TSG101Q99816 390 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 COLEC11Q9BWP8 271 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 LMAN2LQ9H0V9 348 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 PRDM12Q9H4Q4 367 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 HCSTQ9UBK5 93 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 MAPK8IP1Q9UQF2 711 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 DERAQ9Y315 318 aa17.38■□□□□ 0.37
SSBP1-214ENST00000498107 LACTBL1A8MY62 500 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 PSMA7O14818 248 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 CLIC2O15247 247 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 EXOC3O60645 756 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 FGF18O76093 207 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 PRCPP42785 496 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 OR1G1P47890 313 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 CYP2J2P51589 502 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 BMS1Q14692 1282 aaKnown RBP17.37■□□□□ 0.37
SSBP1-214ENST00000498107 NFIL3Q16649 462 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 GLRA4Q5JXX5 417 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 ZBTB41Q5SVQ8 909 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 CRELD2Q6UXH1 353 aaPredicted RBP17.37■□□□□ 0.37
SSBP1-214ENST00000498107 Q7L0L9 218 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 SPRED2Q7Z698 418 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 BRSK2Q8IWQ3 736 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 SLC39A11Q8N1S5 342 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 KLHL23Q8NBE8 558 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 FAM212AQ96EL1 285 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 DDX27Q96GQ7 796 aaKnown RBP17.37■□□□□ 0.37
SSBP1-214ENST00000498107 DHTKD1Q96HY7 919 aaPredicted RBP17.37■□□□□ 0.37
SSBP1-214ENST00000498107 FBXL18Q96ME1 805 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 RBAKQ9NYW8 714 aaPredicted RBP17.37■□□□□ 0.37
SSBP1-214ENST00000498107 LMCD1Q9NZU5 365 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 DNAJB4Q9UDY4 337 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 UBQLN1Q9UMX0 589 aaKnown RBP17.37■□□□□ 0.37
SSBP1-214ENST00000498107 PLAGL2Q9UPG8 496 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 LZTS1Q9Y250 596 aa17.37■□□□□ 0.37
SSBP1-214ENST00000498107 GOLGA8IPA6NC78 632 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms