RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 NFIL3Q16649 462 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 DCAF17Q5H9S7 520 aaPredicted RBP7.56□□□□□ -1.2
UBR4-214ENST00000486515 DEFB128Q7Z7B8 93 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 FAM228AQ86W67 206 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 CD302Q8IX05 232 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 C12orf56Q8IXR9 622 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 RNF169Q8NCN4 708 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 GLIS3Q8NEA6 775 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 CACTINQ8WUQ7 758 aaKnown RBP7.56□□□□□ -1.2
UBR4-214ENST00000486515 DHX38Q92620 1227 aaKnown RBP7.56□□□□□ -1.2
UBR4-214ENST00000486515 KCNN1Q92952 543 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 CNOT6LQ96LI5 555 aaKnown RBP7.56□□□□□ -1.2
UBR4-214ENST00000486515 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
UBR4-214ENST00000486515 FIZ1Q96SL8 496 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 ADAM2Q99965 735 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 FUCA2Q9BTY2 467 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 NOC4LQ9BVI4 516 aaKnown RBP7.56□□□□□ -1.2
UBR4-214ENST00000486515 STRA6Q9BX79 667 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 FGFBP2Q9BYJ0 223 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 CCDC113Q9H0I3 377 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 KCTD10Q9H3F6 313 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 MINDY3Q9H8M7 445 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 CDHR5Q9HBB8 845 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 CD320Q9NPF0 282 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 C1orf112Q9NSG2 853 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 FANCLQ9NW38 375 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 RBAKQ9NYW8 714 aaPredicted RBP7.56□□□□□ -1.2
UBR4-214ENST00000486515 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.56□□□□□ -1.2
UBR4-214ENST00000486515 GPR179Q6PRD1 2367 aa7.56□□□□□ -1.2
UBR4-214ENST00000486515 A0A0B4J269 797 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 ZBBXA8MT70 800 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 KCNJ18B7U540 433 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 KIAA0355O15063 1070 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 MAPK13O15264 365 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 TGFB1I1O43294 461 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 PHACTR2O75167 634 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 TNNC2P02585 160 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 AMHP03971 560 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 TMEM191BP0C7N4 346 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 DLATP10515 647 aaKnown RBP7.55□□□□□ -1.2
UBR4-214ENST00000486515 TNNI1P19237 187 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 CYP2C18P33260 490 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 VAMP7P51809 220 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 AP3M2P53677 418 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 POU5F1Q01860 360 aaKnown RBP7.55□□□□□ -1.2
UBR4-214ENST00000486515 FPGSQ05932 587 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 MGAT3Q09327 533 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 KCNJ12Q14500 433 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 LPIN1Q14693 890 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 TRIM71Q2Q1W2 868 aaKnown RBP7.55□□□□□ -1.2
UBR4-214ENST00000486515 HSP90AA4PQ58FG1 418 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 TCP11X2Q5H9J9 407 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 MFSD5Q6N075 450 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 TTI2Q6NXR4 508 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 CNKSR3Q6P9H4 555 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 SLC24A5Q71RS6 500 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 FRMD5Q7Z6J6 570 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 DRC7Q8IY82 874 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 URGCPQ8TCY9 931 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 RSPH1Q8WYR4 309 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 SAAL1Q96ER3 474 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 SCLYQ96I15 445 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 ANKRD36BP1Q96IX9 119 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 RNPC3Q96LT9 517 aaKnown RBP7.55□□□□□ -1.2
UBR4-214ENST00000486515 FAM193BQ96PV7 902 aaPredicted RBP7.55□□□□□ -1.2
UBR4-214ENST00000486515 CBWD1Q9BRT8 395 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 TUBGCP2Q9BSJ2 902 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 APOL6Q9BWW8 343 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 IMPG2Q9BZV3 1241 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 TRIM5Q9C035 493 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 PDZD7Q9H5P4 517 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 RALYQ9UKM9 306 aaKnown RBP7.55□□□□□ -1.2
UBR4-214ENST00000486515 PCDHB7Q9Y5E2 793 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 ACACBO00763 2458 aa7.55□□□□□ -1.2
UBR4-214ENST00000486515 A0A0U1RQF3 1178 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 ABHD14A-ACY1A0A1B0GW23 586 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 GOLGA8IPA6NC78 632 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 GOLGA8JA6NMD2 632 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 ANKRD63C9JTQ0 380 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 EOMESO95936 686 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 FGBP02675 491 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 ALADP13716 330 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
UBR4-214ENST00000486515 GRM5P41594 1212 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 ACOT2P49753 483 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 PMS1P54277 932 aaKnown RBP7.54□□□□□ -1.2
UBR4-214ENST00000486515 UBASH3AP57075 661 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 BIRC3Q13489 604 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 TRPC3Q13507 836 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 AMHR2Q16671 573 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 MAN2A1Q16706 1144 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 ZCWPW2Q504Y3 356 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 WDR44Q5JSH3 913 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 GLB1LQ6UWU2 654 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 TAS1R3Q7RTX0 852 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 CDR2LQ86X02 465 aaPredicted RBP7.54□□□□□ -1.2
UBR4-214ENST00000486515 DHX40Q8IX18 779 aaKnown RBP7.54□□□□□ -1.2
UBR4-214ENST00000486515 MICALL1Q8N3F8 863 aa7.54□□□□□ -1.2
UBR4-214ENST00000486515 PRSS33Q8NF86 280 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms