RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 SDCCAG8Q86SQ7 713 aaPredicted RBP16.5■□□□□ 0.23
PPFIA4-205ENST00000486360 KLC2Q9H0B6 622 aa16.5■□□□□ 0.23
PPFIA4-205ENST00000486360 INTUQ9ULD6 942 aa16.5■□□□□ 0.23
PPFIA4-205ENST00000486360 FOXN3O00409 490 aaPredicted RBP16.5■□□□□ 0.23
PPFIA4-205ENST00000486360 CELF2O95319 508 aaKnown RBP16.5■□□□□ 0.23
PPFIA4-205ENST00000486360 FAF2Q96CS3 445 aa16.5■□□□□ 0.23
PPFIA4-205ENST00000486360 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
PPFIA4-205ENST00000486360 MEIS2O14770 477 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 IL18RAPO95256 599 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 NAMPTP43490 491 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 GPC2Q8N158 579 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 CTIFO43310 598 aaKnown RBP16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 BMP6P22004 513 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 HOXD10P28358 340 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 OAZ1P54368 228 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 TMEM62Q0P6H9 643 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 NOA1Q8NC60 698 aaKnown RBP16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 NIF3L1Q9GZT8 377 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 LACRTQ9GZZ8 138 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 ZCCHC17Q9NP64 241 aaKnown RBP16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 TRAF3IP3Q9Y228 551 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 CAPN7Q9Y6W3 813 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 CYP2C9P11712 490 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 GARTP22102 1010 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 PMS2P54278 862 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 TSPY1Q01534 308 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 MYBPC2Q14324 1141 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 CDR2LQ86X02 465 aaPredicted RBP16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 DNERQ8NFT8 737 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 HAS1Q92839 578 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 TNIP3Q96KP6 325 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 GOLPH3Q9H4A6 298 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 RBM12Q9NTZ6 932 aaKnown RBP16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 SMARCAL1Q9NZC9 954 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 WDR35Q9P2L0 1181 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 ALG6Q9Y672 507 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 GTF2A2P52657 109 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 TERF2Q15554 542 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 ZNF507Q8TCN5 953 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 SCYL1Q96KG9 808 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 KATNAL1Q9BW62 490 aa16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.49■□□□□ 0.23
PPFIA4-205ENST00000486360 CA4P22748 312 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 BCAR1P56945 870 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 IFT88Q13099 833 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 DGKDQ16760 1214 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 RUBCNQ92622 972 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 KCNMB3Q9NPA1 279 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 ARHGAP20Q9P2F6 1191 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 CPSF3Q9UKF6 684 aaKnown RBP16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 HERVK_113P62684 666 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 EPC2Q52LR7 807 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 TRAPPC11Q7Z392 1133 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 PRPF31Q8WWY3 499 aaKnown RBP16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 CCDC68Q9H2F9 335 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 DUSP10Q9Y6W6 482 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 MORC2Q9Y6X9 1032 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 OGTO15294 1046 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 TATDN1Q6P1N9 297 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 COMTP21964 271 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 CDH6P55285 790 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 PCGF5Q86SE9 256 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 ZNF677Q86XU0 584 aa16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 IPO11Q9UI26 975 aaKnown RBP16.48■□□□□ 0.23
PPFIA4-205ENST00000486360 KRT14P02533 472 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 WEE2P0C1S8 567 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 GPS1Q13098 491 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 PDCLQ13371 301 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 STILQ15468 1287 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 FBXO16Q8IX29 292 aaPredicted RBP16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 MAGED2Q9UNF1 606 aaPredicted RBP16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 ROBO3Q96MS0 1386 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 GTPBP10A4D1E9 387 aaKnown RBP16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 WNT7AO00755 349 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 CXCL11O14625 94 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 ATMINO43313 823 aaPredicted RBP16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 RARBP10826 455 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 LIG3P49916 1009 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 NLRP11P59045 1033 aaKnown RBP16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 IL17AQ16552 155 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 MUM1L1Q5H9M0 696 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 ANKRD7Q92527 254 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 TNFRSF25Q93038 417 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 CFAP36Q96G28 342 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 SENP7Q9BQF6 1050 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 TMEM117Q9H0C3 514 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 ZFYVE28Q9HCC9 887 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 FBXL5Q9UKA1 691 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 FRMPD4Q14CM0 1322 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 TYW5A2RUC4 315 aaKnown RBP16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 RRN3P2A6NIE6 340 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 LRRC10BA6NIK2 292 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 PI4K2BG5E9Z4 385 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 TTI1O43156 1089 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 PTPRAP18433 802 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 GCLCP48506 637 aaPredicted RBP16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 TBX2Q13207 712 aaPredicted RBP16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 SEZ6Q53EL9 994 aa16.47■□□□□ 0.23
PPFIA4-205ENST00000486360 RWDD4Q6NW29 188 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms