RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PRR16Q569H4 304 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 HERC4Q5GLZ8 1057 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 NCAPH2Q6IBW4 605 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 CENPPQ6IPU0 288 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 FBXO38Q6PIJ6 1188 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 ZNF662Q6ZS27 426 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 CBLL1Q75N03 491 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 KRT26Q7Z3Y9 468 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 VPS36Q86VN1 386 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 NIM1KQ8IY84 436 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 TOP6BLQ8N6T0 577 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 ACRBPQ8NEB7 543 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 ZNF507Q8TCN5 953 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 BCL7CQ8WUZ0 217 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 SECISBP2LQ93073 1101 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 EIF3CQ99613 913 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 DUSP9Q99956 384 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MMTAG2Q9BU76 263 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MXD3Q9BW11 206 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 NDST4Q9H3R1 872 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MMRN2Q9H8L6 949 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MRPL44Q9H9J2 332 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 NHEJ1Q9H9Q4 299 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 BLOC1S4Q9NUP1 217 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 GUCA1BQ9UMX6 200 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 MRPL11Q9Y3B7 192 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 COL4A3BPQ9Y5P4 624 aa6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 ARID1BQ8NFD5 2236 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-204ENST00000474020 A0A0U1RQG5 324 aaPredicted RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 CCDC151A5D8V7 595 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 DDTLA6NHG4 134 aaPredicted RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 PSMD14O00487 310 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 NDUFB10O96000 172 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 GH2P01242 217 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 EPB41P11171 864 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 MUTP22033 750 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 VAV2P52735 878 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 PMS1P54277 932 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 SETQ01105 290 aaPredicted RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 TNFAIP1Q13829 316 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 IFI16Q16666 785 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 USH1GQ495M9 461 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 SLC9C1Q4G0N8 1177 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 TDRD12Q587J7 1177 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 ZBTB37Q5TC79 503 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 CCDC181Q5TID7 509 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 SFMBT2Q5VUG0 894 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 FKBP1CQ5VVH2 108 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 BTNL9Q6UXG8 535 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 C12orf40Q86WS4 652 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 IRF2BP1Q8IU81 584 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 WFDC3Q8IUB2 231 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 PLD6Q8N2A8 252 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 SLC35F6Q8N357 371 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 TTLL6Q8N841 843 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 FAM181AQ8N9Y4 354 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 KIAA0895Q8NCT3 520 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 TRIM58Q8NG06 486 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 FAM151AQ8WW52 585 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 SYN2Q92777 582 aaPredicted RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 CCDC43Q96MW1 224 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 MBOAT7Q96N66 472 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 PSMD1Q99460 953 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 IFIH1Q9BYX4 1025 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 WDR11Q9BZH6 1224 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 TDRD3Q9H7E2 651 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 METTL14Q9HCE5 456 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 TUFT1Q9NNX1 390 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 KCNMB3Q9NPA1 279 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 PICK1Q9NRD5 415 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 CEP72Q9P209 647 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 MYO6Q9UM54 1294 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 RNF114Q9Y508 228 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 AK5Q9Y6K8 562 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 ANKRD31Q8N7Z5 1873 aa6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 BAZ2BQ9UIF8 2168 aaKnown RBP6.44□□□□□ -1.38
ATPAF1-204ENST00000474020 SSU72P8A0A1W2PR75 194 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 TCP10L2B9ZVM9 353 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 PLA2G6O60733 806 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 GAS7O60861 476 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 PPP1R11O60927 126 aaPredicted RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 CEACAM5P06731 702 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 CYP3A4P08684 503 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 CCDC172P0C7W6 258 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 ANXA13P27216 316 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 RPA1P27694 616 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 CIITAP33076 1130 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 CACNB3P54284 484 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 NAP1L1P55209 391 aaKnown RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 OXCT1P55809 520 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 ADAM9Q13443 819 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 SLC15A2Q16348 729 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 EAPPQ56P03 285 aaPredicted RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 HSP90B2PQ58FF3 399 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 UTP14CQ5TAP6 766 aaKnown RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 USP17L6PQ6QN14 398 aa6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 RSRC2Q7L4I2 434 aaKnown RBP6.43□□□□□ -1.38
ATPAF1-204ENST00000474020 RRAGAQ7L523 313 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms