RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 FAM213AQ9BRX8 229 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 HERPUD2Q9BSE4 406 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 DDX23Q9BUQ8 820 aaKnown RBP16.2■□□□□ 0.18
CSDC2-201ENST00000306149 SLC38A10Q9HBR0 1119 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 TMEM8AQ9HCN3 771 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 SLC40A1Q9NP59 571 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 KLC4Q9NSK0 619 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 PGAP2Q9UHJ9 254 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 ANAPC7Q9UJX3 599 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 MTUS1Q9ULD2 1270 aa16.2■□□□□ 0.18
CSDC2-201ENST00000306149 WDR64B1ANS9 1081 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 EGFRP00533 1210 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 IFNAR2P48551 515 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 ARHGEF16Q5VV41 709 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 CHMP6Q96FZ7 201 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 ST6GALNAC4Q9H4F1 302 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 GABBR1Q9UBS5 961 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 HNRNPDLO14979 420 aaKnown RBP16.19■□□□□ 0.18
CSDC2-201ENST00000306149 RIPK2O43353 540 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 ZNF862O60290 1169 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 MTA2O94776 668 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 ACSL3O95573 720 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 VPS41P49754 854 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 TAX1BP1Q86VP1 789 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 MAP4K3Q8IVH8 894 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 CCDC114Q96M63 670 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 NCAPGQ9BPX3 1015 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 CHST7Q9NS84 486 aa16.19■□□□□ 0.18
CSDC2-201ENST00000306149 CTDP1Q9Y5B0 961 aaPredicted RBP16.19■□□□□ 0.18
CSDC2-201ENST00000306149 GGPS1O95749 300 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 MMP13P45452 471 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 GPC3P51654 580 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 MTMR2Q13614 643 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 ACAD10Q6JQN1 1059 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 OTUD6AQ7L8S5 288 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 PWWP2AQ96N64 755 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 IWS1Q96ST2 819 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 GEMIN8Q9NWZ8 242 aaKnown RBP16.18■□□□□ 0.18
CSDC2-201ENST00000306149 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 O00370 1275 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 WDR46O15213 610 aaKnown RBP16.18■□□□□ 0.18
CSDC2-201ENST00000306149 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
CSDC2-201ENST00000306149 MAPK4P31152 587 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 BAATQ14032 418 aaPredicted RBP16.18■□□□□ 0.18
CSDC2-201ENST00000306149 LONRF1Q17RB8 773 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 SGO2Q562F6 1265 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 CROCCP2Q86T23 111 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 TMEM174Q8WUU8 243 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 PSPC1Q8WXF1 523 aaKnown RBP16.18■□□□□ 0.18
CSDC2-201ENST00000306149 ART4Q93070 314 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 BICD1Q96G01 975 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 PRMT1Q99873 361 aaKnown RBP16.18■□□□□ 0.18
CSDC2-201ENST00000306149 PARP2Q9UGN5 583 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 COQ4Q9Y3A0 265 aa16.18■□□□□ 0.18
CSDC2-201ENST00000306149 CHUKO15111 745 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 MAPK13O15264 365 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 ECEL1O95672 775 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 GHRP10912 638 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 RRM1P23921 792 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 KRT17Q04695 432 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 CYP24A1Q07973 514 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 CYP1B1Q16678 543 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 SPOPLQ6IQ16 392 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 FAM83AQ86UY5 434 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
CSDC2-201ENST00000306149 CCT6BQ92526 530 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 JPH2Q9BR39 696 aaPredicted RBP16.17■□□□□ 0.18
CSDC2-201ENST00000306149 HEMGNQ9BXL5 484 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 KDM4CQ9H3R0 1056 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 CNOT7Q9UIV1 285 aaKnown RBP16.17■□□□□ 0.18
CSDC2-201ENST00000306149 PASKQ96RG2 1323 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 RASGRF2O14827 1237 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 TP73O15350 636 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 CFHP08603 1231 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 CREB1P16220 341 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 SCP2P22307 547 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 CHKAP35790 457 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 WNT7BP56706 349 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 GSCP56915 257 aaPredicted RBP16.17■□□□□ 0.18
CSDC2-201ENST00000306149 SWSAP1Q6NVH7 229 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 ATXN2LQ8WWM7 1075 aaKnown RBP16.17■□□□□ 0.18
CSDC2-201ENST00000306149 ZNF516Q92618 1163 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 ZNF317Q96PQ6 595 aaPredicted RBP16.17■□□□□ 0.18
CSDC2-201ENST00000306149 TMEM109Q9BVC6 243 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 ASIC3Q9UHC3 531 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 RGPD3A6NKT7 1758 aaPredicted RBP16.17■□□□□ 0.18
CSDC2-201ENST00000306149 RGPD4Q7Z3J3 1758 aa16.17■□□□□ 0.18
CSDC2-201ENST00000306149 SCTRP47872 440 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 JAK3P52333 1124 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 CXCL9Q07325 125 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 ADCY2Q08462 1091 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 CALCOCO2Q13137 446 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 AUHQ13825 339 aaKnown RBP16.16■□□□□ 0.18
CSDC2-201ENST00000306149 LRRC14Q15048 493 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 CLEC16AQ2KHT3 1053 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 PASD1Q8IV76 773 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 LRRC34Q8IZ02 419 aa16.16■□□□□ 0.18
CSDC2-201ENST00000306149 MGARPQ8TDB4 240 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms