RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FBXL13Q8NEE6 735 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 ZWILCHQ9H900 591 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 PPCSQ9HAB8 311 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 PSMC3IPQ9P2W1 217 aaPredicted RBP15.54■□□□□ 0.08
VPS36-207ENST00000611132 PHTF1Q9UMS5 762 aa15.54■□□□□ 0.08
VPS36-207ENST00000611132 SLC16A4O15374 487 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 ERFP50548 548 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 RASSF3Q86WH2 238 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 CEP70Q8NHQ1 597 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 INPP4AQ96PE3 977 aaPredicted RBP15.53■□□□□ 0.08
VPS36-207ENST00000611132 WWP1Q9H0M0 922 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 A1CFQ9NQ94 594 aaKnown RBP15.53■□□□□ 0.08
VPS36-207ENST00000611132 CHORDC1Q9UHD1 332 aaPredicted RBP15.53■□□□□ 0.08
VPS36-207ENST00000611132 ACADSP16219 412 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 ZC2HC1CQ53FD0 456 aaPredicted RBP15.53■□□□□ 0.08
VPS36-207ENST00000611132 SPDYCQ5MJ68 293 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 TMEM179Q6ZVK1 233 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 C16orf86Q6ZW13 317 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 ENOSF1Q7L5Y1 443 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 ERICH1Q86X53 443 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 PPM1NQ8N819 430 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 ATXN2LQ8WWM7 1075 aaKnown RBP15.53■□□□□ 0.08
VPS36-207ENST00000611132 ALKBH8Q96BT7 664 aaKnown RBP15.53■□□□□ 0.08
VPS36-207ENST00000611132 TUFT1Q9NNX1 390 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 CD58P19256 250 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 RFC1P35251 1148 aaPredicted RBP15.53■□□□□ 0.08
VPS36-207ENST00000611132 MED15Q96RN5 788 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 DCLRE1BQ9H816 532 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 PSMA2P25787 234 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 SLC12A2P55011 1212 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 KRT80Q6KB66 452 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 TMEM270Q6UE05 265 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 NT5DC3Q86UY8 548 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 ANKMY2Q8IV38 441 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 TRIML2Q8N7C3 387 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 BAP1Q92560 729 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 FAF2Q96CS3 445 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 SEPT9Q9UHD8 586 aaPredicted RBP15.53■□□□□ 0.08
VPS36-207ENST00000611132 IP6K2Q9UHH9 426 aa15.53■□□□□ 0.08
VPS36-207ENST00000611132 EIF3DO15371 548 aaKnown RBP eCLIP15.52■□□□□ 0.08
VPS36-207ENST00000611132 IL17AQ16552 155 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 NUDCD3Q8IVD9 361 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 TMEM35BQ8NCS4 154 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 SLC26A7Q8TE54 656 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 LXNQ9BS40 222 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 WNT7AO00755 349 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 OPLAHO14841 1288 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 RIPK2O43353 540 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 DRD4P21917 467 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 CASP4P49662 377 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 MMEL1Q495T6 779 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 LVRNQ6Q4G3 990 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 ANO5Q75V66 913 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 APTXQ7Z2E3 356 aaKnown RBP15.52■□□□□ 0.08
VPS36-207ENST00000611132 CCDC125Q86Z20 511 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 SCYL1Q96KG9 808 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 PNMA5Q96PV4 448 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 CSRNP1Q96S65 589 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 PAPOLBQ9NRJ5 636 aaKnown RBP15.52■□□□□ 0.08
VPS36-207ENST00000611132 BLOC1S4Q9NUP1 217 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 ABCF3Q9NUQ8 709 aa15.52■□□□□ 0.08
VPS36-207ENST00000611132 DEUP1Q05D60 604 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 KDSRQ06136 332 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 CATSPER3Q86XQ3 398 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 AGAP11Q8TF27 550 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 PPWD1Q96BP3 646 aaKnown RBP15.52■□□□□ 0.07
VPS36-207ENST00000611132 OSBPL8Q9BZF1 889 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 WHRNQ9P202 907 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 FOXN3O00409 490 aaPredicted RBP15.52■□□□□ 0.07
VPS36-207ENST00000611132 ALDH1B1P30837 517 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 MED21Q13503 144 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 MIGA2Q7L4E1 593 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 ZBTB8OSQ8IWT0 167 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.07
VPS36-207ENST00000611132 JMJD4Q9H9V9 463 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 GTF3C4Q9UKN8 822 aa15.52■□□□□ 0.07
VPS36-207ENST00000611132 CFLARO15519 480 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 AKAP3O75969 853 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 ZBED1O96006 694 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 CALB1P05937 261 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 ENO1P06733 434 aaKnown RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 GNAT1P11488 350 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 NKX1-1Q15270 411 aaPredicted RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 RCN1Q15293 331 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 RABGAP1LQ5R372 815 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 TRIM72Q6ZMU5 477 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 HAUS6Q7Z4H7 955 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 ZNF354CQ86Y25 554 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 GABPB2Q8TAK5 448 aaPredicted RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 NSL1Q96IY1 281 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 FAM96AQ9H5X1 160 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 MCM8Q9UJA3 840 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 MEGF6O75095 1541 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 ABCD1P33897 745 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 NLRP9Q7RTR0 991 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 TRIM50Q86XT4 487 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 MTO1Q9Y2Z2 717 aaKnown RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 FLT1P17948 1338 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms