RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 RBM12Q9NTZ6 932 aaKnown RBP4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 SLC5A4Q9NY91 659 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 MCM8Q9UJA3 840 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 SIK3Q9Y2K2 1263 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 ATP8A1Q9Y2Q0 1164 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 CHST2Q9Y4C5 530 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 GPR45Q9Y5Y3 372 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 K7ESF4 209 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 PHF2O75151 1096 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 NCR1O76036 304 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 MT-CO1P00395 513 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 ALOX15P16050 662 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 MCAMP43121 646 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 SLC6A9P48067 706 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 FLT3LGP49771 235 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 RAP2BP61225 183 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 BMT2Q1RMZ1 405 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 ZNF572Q7Z3I7 529 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 VRK3Q8IV63 474 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 RPUSD2Q8IZ73 545 aaKnown RBP4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 PPM1NQ8N819 430 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 CHFRQ96EP1 664 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 PAWRQ96IZ0 340 aaKnown RBP4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 PHACTR3Q96KR7 559 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 FAM193BQ96PV7 902 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 UHRF1Q96T88 793 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 BCO1Q9HAY6 547 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 POGKQ9P215 609 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 DNM3Q9UQ16 869 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 WASHC2AQ641Q2 1341 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 PNPLA7Q6ZV29 1317 aa4.69□□□□□ -1.66
HMGB1P29-201ENST00000505659 GSPT1P15170 499 aaKnown RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 ZSCAN20P17040 1043 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 AGXTP21549 392 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 PCSK1P29120 753 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 PTGS2P35354 604 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 ALDH1A3P47895 512 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 CHN2P52757 468 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 PER3P56645 1201 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 EVA1CP58658 441 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 FAPQ12884 760 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 FAM50AQ14320 339 aaKnown RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 CLUL1Q15846 466 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 ABCB5Q2M3G0 1257 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 INAVAQ3KP66 663 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 PDCD4Q53EL6 469 aaKnown RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 FAM47AQ5JRC9 791 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 AFMIDQ63HM1 303 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 METRNLQ641Q3 311 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 EFCAB12Q6NXP0 572 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 DRICH1Q6PGQ1 229 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 LRRC55Q6ZSA7 311 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 PDZD4Q76G19 769 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 GDF7Q7Z4P5 450 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 AMER2Q8N7J2 671 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 DPF2Q92785 391 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 HAS1Q92839 578 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 RAB24Q969Q5 203 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 LENG9Q96B70 501 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 ADI1Q9BV57 179 aa4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 CCDC8Q9H0W5 538 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 ZNF277Q9NRM2 450 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 AJAP1Q9UKB5 411 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P29-201ENST00000505659 CADPSQ9ULU8 1353 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 CENPVL1A0A0U1RR11 272 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 KATNA1O75449 491 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 RECQL4O94761 1208 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 RAP2AP10114 183 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 GUCY1A2P33402 732 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 SLC5A3P53794 718 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 TGFB2P61812 414 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 AMPD3Q01432 767 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 DPTQ07507 201 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 MGAT2Q10469 447 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 FSTL1Q12841 308 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 ANO4Q32M45 955 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 ATXN7L2Q5T6C5 722 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 FAM102AQ5T9C2 384 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 PCSK4Q6UW60 755 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 ZGPATQ8N5A5 531 aaKnown RBP4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 PROKR1Q8TCW9 393 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 MYOCQ99972 504 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 TTPALQ9BTX7 342 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 MRI1Q9BV20 369 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 SLC46A2Q9BY10 475 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 SENP6Q9GZR1 1112 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 AKIP1Q9NQ31 210 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 ANKFY1Q9P2R3 1169 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 TUBD1Q9UJT1 453 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 ZBTB21Q9ULJ3 1066 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 FZD1Q9UP38 647 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 RUVBL1Q9Y265 456 aaKnown RBP4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 MAP3K2Q9Y2U5 619 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 USP15Q9Y4E8 981 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 ACTL7AQ9Y615 435 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 HS3ST4Q9Y661 456 aa4.67□□□□□ -1.66
HMGB1P29-201ENST00000505659 DRGXA6NNA5 263 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 SUV39H1O43463 412 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 NDUFA10O95299 355 aa4.66□□□□□ -1.66
HMGB1P29-201ENST00000505659 ABHD16AO95870 558 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms