RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 USP17L8P0C7I0 530 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 MRPS25P82663 173 aaKnown RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 UBE2SQ16763 222 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 TMEM154Q6P9G4 183 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 ZNF677Q86XU0 584 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 SCFD1Q8WVM8 642 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 AP4S1Q9Y587 144 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 UTYO14607 1347 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 STRNO43815 780 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 CTTNQ14247 550 aaKnown RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 EFL1Q7Z2Z2 1120 aaKnown RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 HPS3Q969F9 1004 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 OSBPL8Q9BZF1 889 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 AP5M1Q9H0R1 490 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 PDS5AQ29RF7 1337 aaKnown RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 ASNSP08243 561 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 GCLMP48507 274 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 MTMR1Q13613 665 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 PPP6R3Q5H9R7 873 aaPredicted RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 FBXW10Q5XX13 1052 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 LRRC8EQ6NSJ5 796 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 GADL1Q6ZQY3 521 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 THEM5Q8N1Q8 247 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 APBB2Q92870 758 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 ZFATQ9P243 1243 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 APOA4P06727 396 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 GPC3P51654 580 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 CDK17Q00537 523 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 EFHBQ8N7U6 833 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 HEMGNQ9BXL5 484 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 TRIM9Q9C026 710 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 SLC40A1Q9NP59 571 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 APEX2Q9UBZ4 518 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 G3BP2Q9UN86 482 aaKnown RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 QARSP47897 775 aaKnown RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 EFHC2Q5JST6 749 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 CYB5R4Q7L1T6 521 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 IFT43Q96FT9 208 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 NSL1Q96IY1 281 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 TRIM54Q9BYV2 358 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 CLTCL1P53675 1640 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 CEP152O94986 1710 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 USP17L3A6NCW0 530 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 USP17L4A6NCW7 530 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 EYA4O95677 639 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 PSMC1P62191 440 aaKnown RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 USP17L1Q7RTZ2 530 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 RYBPQ8N488 228 aaPredicted RBP10.11□□□□□ -0.79
SNX1-202ENST00000380285 SH3TC2Q8TF17 1288 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 MAP3K14Q99558 947 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 CNPY3Q9BT09 278 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 CCDC90BQ9GZT6 254 aa10.11□□□□□ -0.79
SNX1-202ENST00000380285 FNTAP49354 379 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 STX3Q13277 289 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 GPD1LQ8N335 351 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 TC2NQ8N9U0 490 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 DTX3LQ8TDB6 740 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 ULK4Q96C45 1275 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 ARHGEF26Q96DR7 871 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 TMEM47Q9BQJ4 181 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 ERP44Q9BS26 406 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 NCOA3Q9Y6Q9 1424 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 MYO3BQ8WXR4 1341 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 LOC102724159A0A0B4J2E5 919 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 TBX3O15119 743 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 SLC16A2P36021 539 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 STAT3P40763 770 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 PWP2Q15269 919 aaKnown RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 USPL1Q5W0Q7 1092 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 BEST2Q8NFU1 509 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 RBM15Q96T37 977 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNX1-202ENST00000380285 VPS33BQ9H267 617 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 ZNF711Q9Y462 761 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 HEY1Q9Y5J3 304 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 KIAA1210Q9ULL0 1709 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 POTEMA6NI47 508 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 TNPO2O14787 897 aaKnown RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 TMED10P49755 219 aaKnown RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 EME1Q96AY2 570 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 CEP95Q96GE4 821 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 MKNK1Q9BUB5 465 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 SLC4A7Q9Y6M7 1214 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 HNRNPH1P31943 449 aaKnown RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 KYNUQ16719 465 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 CDO1Q16878 200 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 ADCK1Q86TW2 530 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 USP38Q8NB14 1042 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 SENP7Q9BQF6 1050 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 C11orf70Q9BRQ4 267 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 MRPL4Q9BYD3 311 aaKnown RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 ATP11BQ9Y2G3 1177 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 ERBB3P21860 1342 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 FGFR4P22455 802 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 DSG1Q02413 1049 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 GRAPQ13588 217 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 WLSQ5T9L3 541 aa10.1□□□□□ -0.79
SNX1-202ENST00000380285 TTC39BQ5VTQ0 682 aaPredicted RBP10.1□□□□□ -0.79
SNX1-202ENST00000380285 GRAPLQ8TC17 118 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms