RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 SLCO1A2P46721 670 aa20.9■□□□□ 0.94
PCDH8-202ENST00000377942 NBPF9Q3BBW0 867 aa20.9■□□□□ 0.94
PCDH8-202ENST00000377942 TAF1BQ53T94 588 aaPredicted RBP20.9■□□□□ 0.94
PCDH8-202ENST00000377942 UNC45AQ9H3U1 944 aa20.9■□□□□ 0.94
PCDH8-202ENST00000377942 NOVA2Q9UNW9 492 aaKnown RBP20.9■□□□□ 0.94
PCDH8-202ENST00000377942 TCF7P36402 384 aaPredicted RBP20.89■□□□□ 0.94
PCDH8-202ENST00000377942 MMEL1Q495T6 779 aa20.89■□□□□ 0.94
PCDH8-202ENST00000377942 PLEKHH3Q7Z736 793 aa20.89■□□□□ 0.94
PCDH8-202ENST00000377942 TADA2BQ86TJ2 420 aa20.89■□□□□ 0.94
PCDH8-202ENST00000377942 ENGASEQ8NFI3 743 aa20.89■□□□□ 0.94
PCDH8-202ENST00000377942 SPOPLQ6IQ16 392 aa20.89■□□□□ 0.94
PCDH8-202ENST00000377942 C1orf228Q6PIY5 440 aa20.89■□□□□ 0.94
PCDH8-202ENST00000377942 KIAA1683Q9H0B3 1180 aa20.89■□□□□ 0.94
PCDH8-202ENST00000377942 MAGED2Q9UNF1 606 aaPredicted RBP20.89■□□□□ 0.94
PCDH8-202ENST00000377942 ADGRB2O60241 1585 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 CREB3O43889 395 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 ITGA4P13612 1032 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 ZNF484Q5JVG2 852 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 GNASQ5JWF2 1037 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 GDAP1Q8TB36 358 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 GBA2Q9HCG7 927 aaPredicted RBP20.89■□□□□ 0.93
PCDH8-202ENST00000377942 TBK1Q9UHD2 729 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 A0A1W2PQJ5 194 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 SLC37A4O43826 429 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 CA4P22748 312 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 NNMTP40261 264 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 TSTA3Q13630 321 aaPredicted RBP20.89■□□□□ 0.93
PCDH8-202ENST00000377942 FSD1LQ9BXM9 530 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 TRPV6Q9H1D0 765 aa20.89■□□□□ 0.93
PCDH8-202ENST00000377942 ZC2HC1CQ53FD0 456 aaPredicted RBP20.88■□□□□ 0.93
PCDH8-202ENST00000377942 DHX35Q9H5Z1 703 aaKnown RBP20.88■□□□□ 0.93
PCDH8-202ENST00000377942 BAIAP2L1Q9UHR4 511 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 SRGAP2O75044 1071 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 VCAM1P19320 739 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 NPEPPSP55786 919 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 KLHL38Q2WGJ6 581 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 Q4G0T1 1027 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 SPATA2LQ8IUW3 424 aaPredicted RBP20.88■□□□□ 0.93
PCDH8-202ENST00000377942 FAN1Q9Y2M0 1017 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 NBPF12Q5TAG4 269 aaPredicted RBP20.88■□□□□ 0.93
PCDH8-202ENST00000377942 RBBP8NLQ8NC74 664 aaPredicted RBP20.88■□□□□ 0.93
PCDH8-202ENST00000377942 DDX50Q9BQ39 737 aaKnown RBP20.88■□□□□ 0.93
PCDH8-202ENST00000377942 PCDHB2Q9Y5E7 798 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 CXCL11O14625 94 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 ACSL3O95573 720 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 CLTAP09496 248 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 SERPINB6P35237 376 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 NFRKBQ6P4R8 1299 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 NOTUMQ6P988 496 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 MRIQ9BWK5 157 aa20.88■□□□□ 0.93
PCDH8-202ENST00000377942 RPLP2P05387 115 aaKnown RBP20.87■□□□□ 0.93
PCDH8-202ENST00000377942 NR1D1P20393 614 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 CYP2C19P33261 490 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 SHMT1P34896 483 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 DDR1Q08345 913 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 DHX34Q14147 1143 aaKnown RBP20.87■□□□□ 0.93
PCDH8-202ENST00000377942 ATG16L1Q676U5 607 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 STK38LQ9Y2H1 464 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 HLA-DRAP01903 254 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 CTSHP09668 335 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 SV2CQ496J9 727 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 DACT2Q5SW24 774 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 GLB1LQ6UWU2 654 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 RNF180Q86T96 592 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 MED15Q96RN5 788 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 TUBB6Q9BUF5 446 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 EHD2Q9NZN4 543 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 SLC26A2P50443 739 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 CDH6P55285 790 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 JADE1Q6IE81 842 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 ZNF677Q86XU0 584 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 TRIM59Q8IWR1 403 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 CNPY4Q8N129 248 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 IFT43Q96FT9 208 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 ROR1Q01973 937 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 GRB10Q13322 594 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 ZNF211Q13398 564 aaPredicted RBP20.87■□□□□ 0.93
PCDH8-202ENST00000377942 PCNX4Q63HM2 1172 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 TRAPPC11Q7Z392 1133 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 SCG3Q8WXD2 468 aaKnown RBP20.87■□□□□ 0.93
PCDH8-202ENST00000377942 SYNPO2Q9UMS6 1093 aa20.87■□□□□ 0.93
PCDH8-202ENST00000377942 FOXP2O15409 715 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 GLT1D1Q96MS3 346 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 EPAS1Q99814 870 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 BNIP3LO60238 219 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 VEGFAP15692 232 aaPredicted RBP20.86■□□□□ 0.93
PCDH8-202ENST00000377942 DBN1Q16643 649 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 DCAF4L1Q3SXM0 396 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 MYLK4Q86YV6 388 aaPredicted RBP20.86■□□□□ 0.93
PCDH8-202ENST00000377942 BFARQ9NZS9 450 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 BAG5Q9UL15 447 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 TBX20Q9UMR3 447 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 TADA2AO75478 443 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 PCSK1P29120 753 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 CCT5P48643 541 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 GPATCH11Q8N954 259 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 ANKS1AQ92625 1134 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 FNDC3AQ9Y2H6 1198 aaKnown RBP20.86■□□□□ 0.93
PCDH8-202ENST00000377942 A0A1B0GUA9 196 aa20.86■□□□□ 0.93
PCDH8-202ENST00000377942 LRRC71Q8N4P6 559 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms