RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 HIF1AQ16665 826 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 ZSWIM1Q9BR11 485 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 QTRT2Q9H974 415 aaKnown RBP16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 OLFML2BQ68BL8 750 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 KCTD6Q8NC69 237 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 AIPL1Q9NZN9 384 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 PSMC3IPQ9P2W1 217 aaPredicted RBP16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 H0YCG3 227 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 ATMINO43313 823 aaPredicted RBP16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 DNAJC6O75061 913 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 SLC12A2P55011 1212 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 TRADDQ15628 312 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 SBK1Q52WX2 424 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 ERICH1Q86X53 443 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 EPHB6O15197 1021 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 ACCSLQ4AC99 568 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 DNAL1Q4LDG9 190 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 DAGLBQ8NCG7 672 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 SLC30A5Q8TAD4 765 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 SLC13A1Q9BZW2 595 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 CRCPO75575 148 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 PEX3P56589 373 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 PRPF31Q8WWY3 499 aaKnown RBP16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 KLF6Q99612 283 aaPredicted RBP16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 ZWILCHQ9H900 591 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 TLR3O15455 904 aaKnown RBP16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 CALB2P22676 271 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 SNX16P57768 344 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 SNAP25P60880 206 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 MFN1Q8IWA4 741 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 LRRC43Q8N309 656 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 B4GALNT2Q8NHY0 566 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 FAM118BQ9BPY3 351 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 MTO1Q9Y2Z2 717 aaKnown RBP16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 H3BRJ5 948 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 POLGP54098 1239 aaPredicted RBP16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 OVGP1Q12889 678 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 THEMIS2Q5TEJ8 643 aa16.94■□□□□ 0.3
CLSTN1-201ENST00000361311 A0A0A6YYK5 440 aaPredicted RBP16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 WDR64B1ANS9 1081 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 NOP56O00567 594 aaKnown RBP16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 CACNA2D1P54289 1103 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 ALDH18A1P54886 795 aaKnown RBP16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 RPS6KA2Q15349 733 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 KCNV1Q6PIU1 500 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 IRF2BP1Q8IU81 584 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 RHPN2Q8IUC4 686 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 ADGRF4Q8IZF3 695 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 FAF2Q96CS3 445 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 FOXP3Q9BZS1 431 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 LRCH1Q9Y2L9 728 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 RIPK2O43353 540 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 CD58P19256 250 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 TTLL12Q14166 644 aaPredicted RBP16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 TRIP10Q15642 601 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 ZCWPW2Q504Y3 356 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 STK32AQ8WU08 396 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 ALKBH8Q96BT7 664 aaKnown RBP16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 DRC3Q9H069 523 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 RHBDL2Q9NX52 303 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 TRPC5Q9UL62 973 aaPredicted RBP16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 LRRIQ4A6NIV6 560 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 ATP9AO75110 1047 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 ABCB5Q2M3G0 1257 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 ZNF354CQ86Y25 554 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 TTC13Q8NBP0 860 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 PDZD8Q8NEN9 1154 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 CCT6BQ92526 530 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 OSBPL7Q9BZF2 842 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 HEY2Q9UBP5 337 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 INPP4AQ96PE3 977 aaPredicted RBP16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 TMEM237Q96Q45 408 aa16.93■□□□□ 0.3
CLSTN1-201ENST00000361311 DNM1LO00429 736 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 EYA4O95677 639 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 SNX30Q5VWJ9 437 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 RBBP8NLQ8NC74 664 aaPredicted RBP16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 DEPDC1BQ8WUY9 529 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 RGL1Q9NZL6 768 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 FANCGO15287 622 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 BMP3P12645 472 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 ALAS1P13196 640 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 ATP4AP20648 1035 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 PTPN4P29074 926 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 FSCBQ5H9T9 825 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 MIIPQ5JXC2 388 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 KRT39Q6A163 491 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 GRAMD4Q6IC98 578 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 MAGEC3Q8TD91 643 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 EIF2AK1Q9BQI3 630 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 RNPEPL1Q9HAU8 725 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 MARCOQ9UEW3 520 aaPredicted RBP16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 PAIP2BQ9ULR5 123 aaKnown RBP16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 KIDINS220Q9ULH0 1771 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 JCADQ9P266 1359 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 PI4K2BG5E9Z4 385 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 TMEM191BP0C7N4 346 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 SLC1A1P43005 524 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 BAG6P46379 1132 aa16.92■□□□□ 0.3
CLSTN1-201ENST00000361311 GSCP56915 257 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms