RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 CEP78Q5JTW2 689 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 STAG2Q8N3U4 1231 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 CEP95Q96GE4 821 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 SH3GL2Q99962 352 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 PRR23D1E9PI22 279 aaPredicted RBP17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 PRR23D2P0DMB1 279 aaPredicted RBP17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 CCDC81Q6ZN84 652 aa17.75■□□□□ 0.43
TSPAN3-201ENST00000267970 SARM1Q6SZW1 724 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 PPP4R3CPQ6ZMV5 832 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 RRM2BQ7LG56 351 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 ELMO2Q96JJ3 720 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 DIS3Q9Y2L1 958 aaKnown RBP17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 ATP10DQ9P241 1426 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 IFNA8P32881 189 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 TMED10P49755 219 aaKnown RBP17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 MAPK6Q16659 721 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 THEM5Q8N1Q8 247 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 RIN3Q8TB24 985 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 TBX22Q9Y458 520 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 C21orf2O43822 256 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 TSC22D2O75157 780 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 APRTP07741 180 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 PPARGP37231 505 aaPredicted RBP17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 RECQLP46063 649 aaPredicted RBP17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 C6orf10Q5SRN2 563 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 SLFN12LQ6IEE8 588 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 IP6K2Q9UHH9 426 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 ZBTB39O15060 712 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 IL10P22301 178 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 CIITAP33076 1130 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 MDH1P40925 334 aaKnown RBP17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 ZNF710Q8N1W2 664 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 AGPAT5Q9NUQ2 364 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 LOC100653049A0A140TA62 436 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 KRT34O76011 436 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 STXBP2Q15833 593 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 NBPF9Q3BBW0 867 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 CAPN10Q9HC96 672 aa17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 MORC2Q9Y6X9 1032 aaPredicted RBP17.74■□□□□ 0.43
TSPAN3-201ENST00000267970 CSE1LP55060 971 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 PLEKHM3Q6ZWE6 761 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 CYP26B1Q9NR63 512 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 RGL1Q9NZL6 768 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 A8MXQ7 604 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 AARS2Q5JTZ9 985 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 SLC35G2Q8TBE7 412 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 SMTNL2Q2TAL5 461 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 SRLQ86TD4 932 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 SCAF8Q9UPN6 1271 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 ARHGAP10A1A4S6 786 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 PPP3CCP48454 512 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 ARL6IP4Q66PJ3 421 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 SNRNP48Q6IEG0 339 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 ADGRF4Q8IZF3 695 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 OR9Q1Q8NGQ5 310 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 CCT8L2Q96SF2 557 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 TSSK1BQ9BXA7 367 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 ABT1Q9ULW3 272 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 CLCA2Q9UQC9 943 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 FUT11Q495W5 492 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 C11orf96Q7Z7L8 435 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 CNPY4Q8N129 248 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 SLC25A41Q8N5S1 370 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 COG1Q8WTW3 980 aa17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 SETD1BQ9UPS6 1966 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-201ENST00000267970 MIF4GDA9UHW6 222 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 CALB1P05937 261 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 LXNQ9BS40 222 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 TMEM117Q9H0C3 514 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 EPN3Q9H201 632 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 EXOSC4Q9NPD3 245 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 TFDP2Q14188 446 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 ATP11CQ8NB49 1132 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 ERP27Q96DN0 273 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 SPDYE5A6NIY4 337 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 APOL1O14791 398 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 ZBTB5O15062 677 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 SMNDC1O75940 238 aaKnown RBP eCLIP17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 SPDYE7PQ495Y7 208 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 MIER2Q8N344 545 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 ARHGEF1Q92888 912 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 ZNF302Q9NR11 478 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 PAIP2BQ9ULR5 123 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 ANGPT2O15123 496 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 GRK2P25098 689 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 SULT1E1P49888 294 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 EPC2Q52LR7 807 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 LRRC31Q6UY01 552 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 EME1Q96AY2 570 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 SEC16BQ96JE7 1060 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 OLFM3Q96PB7 478 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 SYNDIG1Q9H7V2 258 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 CHMP2BQ9UQN3 213 aa17.72■□□□□ 0.43
TSPAN3-201ENST00000267970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.71■□□□□ 0.43
TSPAN3-201ENST00000267970 ARIH2O95376 493 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms