RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 MARCH5Q9NX47 278 aa10.31□□□□□ -0.76
PTPN20-216ENST00000506080 EPS15L1Q9UBC2 864 aa10.31□□□□□ -0.76
PTPN20-216ENST00000506080 STK39Q9UEW8 545 aa10.31□□□□□ -0.76
PTPN20-216ENST00000506080 SIT1Q9Y3P8 196 aa10.31□□□□□ -0.76
PTPN20-216ENST00000506080 DMXL1Q9Y485 3027 aa10.31□□□□□ -0.76
PTPN20-216ENST00000506080 CACNA1AO00555 2505 aa10.31□□□□□ -0.76
PTPN20-216ENST00000506080 LRRN2O75325 713 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 MAFO75444 373 aaPredicted RBP10.3□□□□□ -0.76
PTPN20-216ENST00000506080 PSMD10O75832 226 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 CPA1P15085 419 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 GLULP15104 373 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 OR1G1P47890 313 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 FGD1P98174 961 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 PLA2G4FQ68DD2 849 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 PHLDB3Q6NSJ2 640 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 MRPL10Q7Z7H8 261 aaKnown RBP10.3□□□□□ -0.76
PTPN20-216ENST00000506080 PALB2Q86YC2 1186 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 GLYCTKQ8IVS8 523 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 C1orf210Q8IVY1 113 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 RUBCNQ92622 972 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 PHKBQ93100 1093 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 NXPE3Q969Y0 559 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 ZNF707Q96C28 371 aaPredicted RBP10.3□□□□□ -0.76
PTPN20-216ENST00000506080 FOXQ1Q9C009 403 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 IFT122Q9HBG6 1241 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 DLGAP2Q9P1A6 1054 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
PTPN20-216ENST00000506080 CCDC196A0A1B0GTZ2 297 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 F8W810 466 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 PRPF3O43395 683 aaKnown RBP10.29□□□□□ -0.76
PTPN20-216ENST00000506080 KRT37O76014 449 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 GGCXP38435 758 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 GLUD2P49448 558 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
PTPN20-216ENST00000506080 RSPO4Q2I0M5 234 aaPredicted RBP10.29□□□□□ -0.76
PTPN20-216ENST00000506080 UBXN11Q5T124 520 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 KIAA0319Q5VV43 1072 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 ELMSAN1Q6PJG2 1045 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 DCLRE1AQ6PJP8 1040 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 CYP26C1Q6V0L0 522 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 COLGALT2Q8IYK4 626 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 RDM1Q8NG50 284 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 BICD2Q8TD16 824 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 YTHDC1Q96MU7 727 aaKnown RBP10.29□□□□□ -0.76
PTPN20-216ENST00000506080 CNTNAP3BQ96NU0 1288 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 CNTNAP3Q9BZ76 1288 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 NT5C3AQ9H0P0 336 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 MINDY3Q9H8M7 445 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 DLL3Q9NYJ7 618 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 VPS54Q9P1Q0 977 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 DPP7Q9UHL4 492 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 SSX2IPQ9Y2D8 614 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 COL4A3BPQ9Y5P4 624 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 NUMBLQ9Y6R0 609 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 CNTNAP2Q9UHC6 1331 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 ZNF292O60281 2723 aa10.29□□□□□ -0.76
PTPN20-216ENST00000506080 DNAH14Q0VDD8 3507 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 TDP2O95551 362 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 SRGAP2CP0DJJ0 459 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 LAMP2P13473 410 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 ITGA4P13612 1032 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 NCLP19338 710 aaKnown RBP10.28□□□□□ -0.76
PTPN20-216ENST00000506080 HOXA11P31270 313 aaPredicted RBP10.28□□□□□ -0.76
PTPN20-216ENST00000506080 USP11P51784 963 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 RCAN1P53805 252 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 NPEPPSP55786 919 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 HTR4Q13639 388 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 ANO5Q75V66 913 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 CCDC148Q8NFR7 591 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 PJA1Q8NG27 643 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 TBCKQ8TEA7 893 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 TMEM143Q96AN5 459 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 B3GALT6Q96L58 329 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 RPP25Q9BUL9 199 aaKnown RBP10.28□□□□□ -0.76
PTPN20-216ENST00000506080 RHOBTB2Q9BYZ6 727 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 RXFP1Q9HBX9 757 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 MIOSQ9NXC5 875 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 WDR87Q6ZQQ6 2873 aa10.28□□□□□ -0.76
PTPN20-216ENST00000506080 RNF223E7ERA6 249 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 ANHXE9PGG2 379 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 LCE2BO14633 110 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 TGM5O43548 720 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 GAS2O43903 313 aaKnown RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 KINO60870 393 aaKnown RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 RPL17P18621 184 aaKnown RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 MLH1P40692 756 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 SCNN1GP51170 649 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 NLRP5P59047 1200 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 DSG1Q02413 1049 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 Q4G0T1 1027 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 B3GNT9Q6UX72 402 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 Q6ZUG5 572 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 SRGAP1Q7Z6B7 1085 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 RNF168Q8IYW5 571 aaPredicted RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 MAML2Q8IZL2 1156 aaPredicted RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 SUMF1Q8NBK3 374 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 SMG8Q8ND04 991 aaKnown RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 PRPF31Q8WWY3 499 aaKnown RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 BRF1Q92994 677 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 GAD1Q99259 594 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms