RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 LMO3Q8TAP4 145 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 FAM81BQ96LP2 452 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 TGS1Q96RS0 853 aaKnown RBP15.34■□□□□ 0.05
NR1H3-220ENST00000481020 HSD17B14Q9BPX1 270 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 EIF2AK1Q9BQI3 630 aaKnown RBP15.34■□□□□ 0.05
NR1H3-220ENST00000481020 TRAIPQ9BWF2 469 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 CCDC113Q9H0I3 377 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 ADAM22Q9P0K1 906 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 SENP1Q9P0U3 644 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 NYAP2Q9P242 653 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 CD2APQ9Y5K6 639 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 SMIM23A6NLE4 172 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L15C9J2P7 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L13C9JLJ4 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L11C9JVI0 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L18D6R9N7 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L22D6RA61 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L17D6RBQ6 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L19D6RCP7 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L20D6RJB6 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 PIK3CDO00329 1044 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 DCTN3O75935 186 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 ALDH3A1P30838 453 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 CENPCQ03188 943 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L24Q0WX57 530 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 CBWD6Q4V339 395 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 CBWD3Q5JTY5 395 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 CBWD5Q5RIA9 395 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 MFSD14BQ5SR56 506 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 WASHC2DQ5SRD0 308 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 USP17L6PQ6QN14 398 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 MYCT1Q8N699 235 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 FITM2Q8N6M3 262 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 KRT35Q92764 455 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 SPDL1Q96EA4 605 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 GJD4Q96KN9 370 aaPredicted RBP15.34■□□□□ 0.05
NR1H3-220ENST00000481020 MTFR1LQ9H019 292 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 DBR1Q9UK59 544 aaKnown RBP15.34■□□□□ 0.05
NR1H3-220ENST00000481020 RTCBQ9Y3I0 505 aaKnown RBP15.34■□□□□ 0.05
NR1H3-220ENST00000481020 L3MBTL1Q9Y468 752 aa15.34■□□□□ 0.05
NR1H3-220ENST00000481020 A6NHS1 94 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 FOXN3O00409 490 aaPredicted RBP15.33■□□□□ 0.04
NR1H3-220ENST00000481020 TRAFD1O14545 582 aaPredicted RBP15.33■□□□□ 0.04
NR1H3-220ENST00000481020 PYGMP11217 842 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 BRAFP15056 766 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 RXRBP28702 533 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 SLCO1A2P46721 670 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 MRPS35P82673 323 aaKnown RBP15.33■□□□□ 0.04
NR1H3-220ENST00000481020 PPP2R5CQ13362 524 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 RASA2Q15283 850 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 TTBK2Q6IQ55 1244 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 RNF207Q6ZRF8 634 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 ADAT2Q7Z6V5 191 aaKnown RBP15.33■□□□□ 0.04
NR1H3-220ENST00000481020 SH3GL3Q99963 347 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 STRA6Q9BX79 667 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 DNAJC18Q9H819 358 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 RNPEPL1Q9HAU8 725 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 SEPT11Q9NVA2 429 aaKnown RBP15.33■□□□□ 0.04
NR1H3-220ENST00000481020 TAS2R14Q9NYV8 317 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 SYNPO2Q9UMS6 1093 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 DAGLAQ9Y4D2 1042 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 USH1CQ9Y6N9 552 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 THSD7AQ9UPZ6 1657 aa15.33■□□□□ 0.04
NR1H3-220ENST00000481020 RSPH10B2B2RC85 870 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 MEIS1O00470 390 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 MSH4O15457 936 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 SPOPO43791 374 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 RSPH10BP0C881 870 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 SHMT1P34896 483 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 GCKP35557 465 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 COPB2P35606 906 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 SLC1A1P43005 524 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 PTP4A2Q12974 167 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 PHLDB3Q6NSJ2 640 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 TDRPQ86YL5 185 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 FAM178BQ8IXR5 827 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 LMNTD2Q8IXW0 634 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 ENDOVQ8N8Q3 282 aaKnown RBP15.32■□□□□ 0.04
NR1H3-220ENST00000481020 ZNF398Q8TD17 642 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 NACC1Q96RE7 527 aa15.32■□□□□ 0.04
NR1H3-220ENST00000481020 TRPC5Q9UL62 973 aaPredicted RBP15.32■□□□□ 0.04
NR1H3-220ENST00000481020 CALB2P22676 271 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 POLGP54098 1239 aaPredicted RBP15.31■□□□□ 0.04
NR1H3-220ENST00000481020 LONRF1Q17RB8 773 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 FAM71AQ8IYT1 594 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 ZDHHC14Q8IZN3 488 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 ZNF564Q8TBZ8 553 aaPredicted RBP15.31■□□□□ 0.04
NR1H3-220ENST00000481020 NAF1Q96HR8 494 aaKnown RBP15.31■□□□□ 0.04
NR1H3-220ENST00000481020 FIZ1Q96SL8 496 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 AAASQ9NRG9 546 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 SMG5Q9UPR3 1016 aaKnown RBP15.31■□□□□ 0.04
NR1H3-220ENST00000481020 KAT6BQ8WYB5 2073 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 QSER1Q2KHR3 1735 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 FAM47DPA6NHR8 397 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 PRPF4O43172 522 aaKnown RBP eCLIP15.31■□□□□ 0.041e-6■■■□□ 14.9
NR1H3-220ENST00000481020 EXOC3O60645 756 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 GNAZP19086 355 aa15.31■□□□□ 0.04
NR1H3-220ENST00000481020 KRT17Q04695 432 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms