RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 ATP6V1G3Q96LB4 118 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 PAGR1Q9BTK6 254 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 COMMD9Q9P000 198 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 ADGRA3Q8IWK6 1321 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 CLPTM1O96005 669 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 ARHGDIBP52566 201 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 VSNL1P62760 191 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 ALDH6A1Q02252 535 aaKnown RBP8.43□□□□□ -1.06
TRPS1-203ENST00000395715 PRUNE1Q86TP1 453 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 IFNEQ86WN2 208 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 TCAIMQ8N3R3 496 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 SLC5A4Q9NY91 659 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 VPS54Q9P1Q0 977 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 KLHL3Q9UH77 587 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 PPIP5K2O43314 1243 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 MBD4O95243 580 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 ABCD1P33897 745 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 HPCAP84074 193 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 GATAD2AQ86YP4 633 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 CCNCP24863 283 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 CIITAP33076 1130 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 ADARP55265 1226 aaKnown RBP8.43□□□□□ -1.06
TRPS1-203ENST00000395715 SLC17A8Q8NDX2 589 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 TSR3Q9UJK0 312 aaKnown RBP8.43□□□□□ -1.06
TRPS1-203ENST00000395715 KIAA1107Q9UPP5 1409 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 PIK3CDO00329 1044 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 WASLO00401 505 aaPredicted RBP8.43□□□□□ -1.06
TRPS1-203ENST00000395715 MFAP3LO75121 409 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 ECDO95905 644 aaPredicted RBP8.43□□□□□ -1.06
TRPS1-203ENST00000395715 RPN2P04844 631 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 MYL1P05976 194 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 RAB2AP61019 212 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 OTUD4Q01804 1114 aaKnown RBP8.43□□□□□ -1.06
TRPS1-203ENST00000395715 STX4Q12846 297 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 XKR9Q5GH70 373 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 THEMIS2Q5TEJ8 643 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 METTL23Q86XA0 190 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 PAIP1Q9H074 479 aaKnown RBP8.43□□□□□ -1.06
TRPS1-203ENST00000395715 PRELID1Q9Y255 219 aa8.43□□□□□ -1.06
TRPS1-203ENST00000395715 LRRIQ4A6NIV6 560 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 F8VZ95 297 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 PPP6R2O75170 966 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 HOXA7P31268 230 aaPredicted RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 TGFBR2P37173 567 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 QARSP47897 775 aaKnown RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 C21orf59P57076 290 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 RBBP4Q09028 425 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ARHGEF16Q5VV41 709 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 PMF1Q6P1K2 205 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 POLNQ7Z5Q5 900 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CROCCP3Q8IVE0 287 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CNBD1Q8NA66 436 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CABLES1Q8TDN4 633 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 RNF139Q8WU17 664 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 LRRC4Q9HBW1 653 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 R3HDM2Q9Y2K5 976 aaKnown RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 EHBP1L1Q8N3D4 1523 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CHP2O43745 196 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CCDC130P13994 396 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CASP4P49662 377 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CDO1Q16878 200 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 SLC9A7Q96T83 725 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CHID1Q9BWS9 393 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 VTA1Q9NP79 307 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 HSPBP1Q9NZL4 362 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 SRP72O76094 671 aaKnown RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ATF4P18848 351 aaPredicted RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 PTPN12Q05209 780 aaKnown RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 SFSWAPQ12872 951 aaKnown RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 C1orf228Q6PIY5 440 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 LRRC8DQ7L1W4 858 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 COPS6Q7L5N1 327 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ATP6V1C1P21283 382 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 SPANXN2Q5MJ10 180 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ZBED8Q8IZ13 594 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 GJA10Q969M2 543 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 EURLQ9NYK6 297 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CSADQ9Y600 493 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 IBTKQ9P2D0 1353 aaPredicted RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 TRIM49BA6NDI0 452 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 TRIM49D1C9J1S8 452 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ALOX12P18054 663 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ATP8B2P98198 1209 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 MYBPC2Q14324 1141 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 MTERF2Q49AM1 385 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 PEG10Q86TG7 708 aaKnown RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 NIM1KQ8IY84 436 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ZNF654Q8IZM8 581 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 RAB42Q8N4Z0 105 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 TSSK1BQ9BXA7 367 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 CYP26B1Q9NR63 512 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 SOS2Q07890 1332 aaPredicted RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 TESPA1A2RU30 521 aaPredicted RBP8.42□□□□□ -1.06
TRPS1-203ENST00000395715 ZNF197O14709 1029 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 NDUFA10O95299 355 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 PPM1NQ8N819 430 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 PSD3Q9NYI0 1048 aa8.42□□□□□ -1.06
TRPS1-203ENST00000395715 DAPK1P53355 1430 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms