RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ING2Q9H160 280 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 ZFATQ9P243 1243 aa20.9■□□□□ 0.94
SHANK1-203ENST00000391813 POTEMA6NI47 508 aa20.89■□□□□ 0.94
SHANK1-203ENST00000391813 GHRP10912 638 aa20.89■□□□□ 0.94
SHANK1-203ENST00000391813 SYN2Q92777 582 aaPredicted RBP20.89■□□□□ 0.94
SHANK1-203ENST00000391813 RICTORQ6R327 1708 aa20.89■□□□□ 0.94
SHANK1-203ENST00000391813 UTYO14607 1347 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 HDAC4P56524 1084 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 PDIA2Q13087 525 aaKnown RBP20.89■□□□□ 0.93
SHANK1-203ENST00000391813 CNGA3Q16281 694 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 KIF2BQ8N4N8 673 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 THAP11Q96EK4 314 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 ANO3Q9BYT9 981 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 CYP2D7A0A087X1C5 515 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 RNF103-CHMP3A0A140T963 221 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 ESYT2A0FGR8 921 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 USP11P51784 963 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 ZBED8Q8IZ13 594 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 ARL8AQ96BM9 186 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 TBC1D23Q9NUY8 699 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 PLAGL2Q9UPG8 496 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 SNX5Q9Y5X3 404 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 RGL2O15211 777 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 DNAJC6O75061 913 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 MYBL1P10243 752 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 SERPINB3P29508 390 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 TAF1BQ53T94 588 aaPredicted RBP20.89■□□□□ 0.93
SHANK1-203ENST00000391813 XXYLT1Q8NBI6 393 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 MCUQ8NE86 351 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 CAVIN3Q969G5 261 aa20.89■□□□□ 0.93
SHANK1-203ENST00000391813 FDPSP14324 419 aaKnown RBP20.88■□□□□ 0.93
SHANK1-203ENST00000391813 GIPC2Q8TF65 315 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 TRIM51Q9BSJ1 452 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 RPS12P25398 132 aaKnown RBP20.88■□□□□ 0.93
SHANK1-203ENST00000391813 COPB2P35606 906 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 MSL3Q8N5Y2 521 aaKnown RBP20.88■□□□□ 0.93
SHANK1-203ENST00000391813 METTL13Q8N6R0 699 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 GIMAP8Q8ND71 665 aaPredicted RBP20.88■□□□□ 0.93
SHANK1-203ENST00000391813 MTBPQ96DY7 904 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 KRT82Q9NSB4 513 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 GOLGA8CPA6NN73 597 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 SNUPNO95149 360 aaKnown RBP20.88■□□□□ 0.93
SHANK1-203ENST00000391813 FCER1AP12319 257 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 OCRLQ01968 901 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 GPS1Q13098 491 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 C7orf25Q9BPX7 421 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.88■□□□□ 0.93
SHANK1-203ENST00000391813 ERICH1Q86X53 443 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 JAMLQ86YT9 394 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 RAPGEF5Q92565 580 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 ZBTB10Q96DT7 871 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 DNAJC7Q99615 494 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 KIF9Q9HAQ2 790 aa20.88■□□□□ 0.93
SHANK1-203ENST00000391813 ZBBXA8MT70 800 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 CCND2P30279 289 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 IFRD2Q12894 506 aaPredicted RBP20.87■□□□□ 0.93
SHANK1-203ENST00000391813 TRIM65Q6PJ69 517 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 TMEM35BQ8NCS4 154 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 MTO1Q9Y2Z2 717 aaKnown RBP20.87■□□□□ 0.93
SHANK1-203ENST00000391813 SNAP23O00161 211 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 O00370 1275 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 IL1RL1Q01638 556 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 PPP1R18Q6NYC8 613 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 DEFB132Q7Z7B7 95 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 TMBIM4Q9HC24 238 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 BARHL2Q9NY43 387 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 TTC7AQ9ULT0 858 aaPredicted RBP20.87■□□□□ 0.93
SHANK1-203ENST00000391813 ZNF233A6NK53 670 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 AARSP49588 968 aaKnown RBP eCLIP20.87■□□□□ 0.93
SHANK1-203ENST00000391813 TFDP1Q14186 410 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 PPM1NQ8N819 430 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 CCNYQ8ND76 341 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 PABPC3Q9H361 631 aaKnown RBP20.87■□□□□ 0.93
SHANK1-203ENST00000391813 CYP26B1Q9NR63 512 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 ZHX2Q9Y6X8 837 aa20.87■□□□□ 0.93
SHANK1-203ENST00000391813 USP17L10C9JJH3 530 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 CALB1P05937 261 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 MORF4L2Q15014 288 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 ANKRD36BP1Q96IX9 119 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 TSSK1BQ9BXA7 367 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 MAP2K7O14733 419 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 NAIF1Q69YI7 327 aaPredicted RBP20.86■□□□□ 0.93
SHANK1-203ENST00000391813 FAM20AQ96MK3 541 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 KCNK16Q96T55 309 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 POLR3CQ9BUI4 534 aaPredicted RBP20.86■□□□□ 0.93
SHANK1-203ENST00000391813 DCP1AQ9NPI6 582 aaPredicted RBP20.86■□□□□ 0.93
SHANK1-203ENST00000391813 SUCLA2Q9P2R7 463 aaPredicted RBP20.86■□□□□ 0.93
SHANK1-203ENST00000391813 PP2D1A8MPX8 630 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 CTDNEP1O95476 244 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 ERVK-24P63145 666 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 SURF1Q15526 300 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 UBE2SQ16763 222 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 INTS2Q9H0H0 1204 aaKnown RBP20.86■□□□□ 0.93
SHANK1-203ENST00000391813 SASH3O75995 380 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 SLC1A1P43005 524 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 LRRC34Q8IZ02 419 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 CYP4F11Q9HBI6 524 aa20.86■□□□□ 0.93
SHANK1-203ENST00000391813 PAPOLBQ9NRJ5 636 aaKnown RBP20.86■□□□□ 0.93
SHANK1-203ENST00000391813 DBR1Q9UK59 544 aaKnown RBP20.86■□□□□ 0.93
SHANK1-203ENST00000391813 ZNF609O15014 1411 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms