RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MARCH8Q5T0T0 291 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 CCSAPQ6IQ19 270 aaPredicted RBP13.13□□□□□ -0.31
USF1-203ENST00000368021 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
USF1-203ENST00000368021 CPLX3Q8WVH0 158 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 PCMTD1Q96MG8 357 aaPredicted RBP13.13□□□□□ -0.31
USF1-203ENST00000368021 DNAJC7Q99615 494 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 BAG1Q99933 345 aaPredicted RBP13.13□□□□□ -0.31
USF1-203ENST00000368021 UPF3AQ9H1J1 476 aaKnown RBP13.13□□□□□ -0.31
USF1-203ENST00000368021 KIAA1586Q9HCI6 787 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 ABHD10Q9NUJ1 306 aa13.13□□□□□ -0.31
USF1-203ENST00000368021 SRGAP2CP0DJJ0 459 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 CAPN2P17655 700 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 KRT9P35527 623 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 KLK7P49862 253 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 ZBED6P86452 979 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 GOLGA8FQ08AF8 430 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 GOLGA8DPQ0D2H9 430 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 MFSD10Q14728 455 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 SNRNP35Q16560 246 aaKnown RBP13.12□□□□□ -0.31
USF1-203ENST00000368021 MAPK6Q16659 721 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 LRRC26Q2I0M4 334 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
USF1-203ENST00000368021 ZNF397Q8NF99 534 aaPredicted RBP13.12□□□□□ -0.31
USF1-203ENST00000368021 OR8K1Q8NGG5 319 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 PPP1R13LQ8WUF5 828 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 HTATIP2Q9BUP3 242 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 STARD7Q9NQZ5 370 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 KCND1Q9NSA2 647 aa13.12□□□□□ -0.31
USF1-203ENST00000368021 MBLAC1A4D2B0 266 aaPredicted RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 RNF225M0QZC1 329 aaPredicted RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 PMM2O15305 246 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 CTIFO43310 598 aaKnown RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 EVI5O60447 810 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 MYL3P08590 195 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 VAMP7P51809 220 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 PURAQ00577 322 aaKnown RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 EXOC3L4Q17RC7 722 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 USP37Q86T82 979 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 NEK11Q8NG66 645 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 LMBR1Q8WVP7 490 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 GLT1D1Q96MS3 346 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 MRPL4Q9BYD3 311 aaKnown RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 FZD8Q9H461 694 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 PLCB1Q9NQ66 1216 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 PHF24Q9UPV7 400 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 P4HA2O15460 535 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 EXTL3O43909 919 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 N4BP1O75113 896 aaKnown RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 PRKCBP05771 671 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 CST5P28325 142 aaPredicted RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 PHKA2P46019 1235 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 FMO5P49326 533 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 PSEN2P49810 448 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 ADAM17P78536 824 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 FAM187BQ17R55 369 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 SLC39A5Q6ZMH5 540 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 GBP6Q6ZN66 633 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 RDH13Q8NBN7 331 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 MFSD14AQ96MC6 490 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 TSEN34Q9BSV6 310 aaKnown RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 IFT122Q9HBG6 1241 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 FAM207AQ9NSI2 230 aaPredicted RBP13.11□□□□□ -0.31
USF1-203ENST00000368021 AGPAT5Q9NUQ2 364 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 SETD4Q9NVD3 440 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 FBXL5Q9UKA1 691 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 AKT3Q9Y243 479 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
USF1-203ENST00000368021 A0A0B4J269 797 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 MOXD2PA6NHM9 499 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 ACKR2O00590 384 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 ZEB2O60315 1214 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 TOM1L1O75674 476 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 HOXC8P31273 242 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 HNRNPH3P31942 346 aaKnown RBP13.1□□□□□ -0.31
USF1-203ENST00000368021 MEA1Q16626 185 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
USF1-203ENST00000368021 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 CBWD2Q8IUF1 395 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 TMTC1Q8IUR5 882 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 C7orf61Q8IZ16 206 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 KIAA0319LQ8IZA0 1049 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 TMC2Q8TDI7 906 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 ZBTB10Q96DT7 871 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 NUCKS1Q9H1E3 243 aaKnown RBP13.1□□□□□ -0.31
USF1-203ENST00000368021 CEP72Q9P209 647 aa13.1□□□□□ -0.31
USF1-203ENST00000368021 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms