RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TACC3Q9Y6A5 838 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 SERPINB3P29508 390 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 HOXA13P31271 388 aaPredicted RBP16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 GRB10Q13322 594 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 NLRX1Q86UT6 975 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 KCNG1Q9UIX4 513 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 MINPP1Q9UNW1 487 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 BCS1LQ9Y276 419 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 CNGA1P29973 690 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 AP3B2Q13367 1082 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 ERMARDQ5T6L9 678 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 PPP1R2P3Q6NXS1 205 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 RHOT1Q8IXI2 618 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 MTBPQ96DY7 904 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 PGM2Q96G03 612 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 MAGEB18Q96M61 343 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 B2RBV5 119 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 YWHAEP62258 255 aaKnown RBP16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 SLIT1O75093 1534 aa16.98■□□□□ 0.31
CLSTN1-201ENST00000361311 FAM205AQ6ZU69 1335 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 ZCCHC18P0CG32 403 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 NMT1P30419 496 aaKnown RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 ARSEP51690 589 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 PTENP60484 403 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 KPNB1Q14974 876 aaKnown RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 SLC13A5Q86YT5 568 aaPredicted RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 WWP1Q9H0M0 922 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 THAP2Q9H0W7 228 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 CDC42EP4Q9H3Q1 356 aaKnown RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 OSGEPQ9NPF4 335 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 CCDC195A0A1B0GUA6 201 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 AP1G2O75843 785 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 DRD4P21917 467 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 GARSP41250 739 aaKnown RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 MAGEA4P43358 317 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 HIC1Q14526 733 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 TMCO4Q5TGY1 634 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 DAB2IPQ5VWQ8 1189 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 RINT1Q6NUQ1 792 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 PPM1NQ8N819 430 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 NSUN4Q96CB9 384 aaKnown RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 FAM20AQ96MK3 541 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 THTPAQ9BU02 230 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 KCNJ2P63252 427 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 THOC5Q13769 683 aaKnown RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 P3H1Q32P28 736 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 MDH1BQ5I0G3 518 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 PPP1R18Q6NYC8 613 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 LVRNQ6Q4G3 990 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 PCGF5Q86SE9 256 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 SPICE1Q8N0Z3 855 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 NEDD1Q8NHV4 660 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 NSL1Q96IY1 281 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 PCDHGC5Q9Y5F6 944 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 USP17L10C9JJH3 530 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 CYP26A1O43174 497 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 NOP14P78316 857 aaKnown RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 ALCAMQ13740 583 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 NLRP9Q7RTR0 991 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 ANKMY2Q8IV38 441 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 NUDCD3Q8IVD9 361 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 SCYL1Q96KG9 808 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 FAM84BQ96KN1 310 aaPredicted RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 EFHD1Q9BUP0 239 aa16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 CHORDC1Q9UHD1 332 aaPredicted RBP16.97■□□□□ 0.31
CLSTN1-201ENST00000361311 CES2O00748 559 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 KRT38O76015 456 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 KMT5AQ9NQR1 393 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 ETAA1Q9NY74 926 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 UVRAGQ9P2Y5 699 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 TESPA1A2RU30 521 aaPredicted RBP16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 PON1P27169 355 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 FNTAP49354 379 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 ART3Q13508 389 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 QPCTQ16769 361 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 NBPF20Q3BBV1 942 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 CENPTQ96BT3 561 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 REEP2Q9BRK0 252 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 CNOT7Q9UIV1 285 aaKnown RBP16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 GPC4O75487 556 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 APBA3O96018 575 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 MYBP10242 640 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 SAT1P21673 171 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 CASP7P55210 303 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 ZBTB17Q13105 803 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 BZW1Q7L1Q6 419 aaKnown RBP16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 PASD1Q8IV76 773 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 SEL1LQ9UBV2 794 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 SIK3Q9Y2K2 1263 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 NEU2Q9Y3R4 380 aa16.96■□□□□ 0.31
CLSTN1-201ENST00000361311 SNX3O60493 162 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 CPA2P48052 419 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 NPEPPSP55786 919 aa16.95■□□□□ 0.3
CLSTN1-201ENST00000361311 XRCC4Q13426 336 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms