RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 RIPK4P57078 832 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 NKG7Q16617 165 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 KYNUQ16719 465 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CATSPEREQ5SY80 951 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 NMD3Q96D46 503 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 DACH2Q96NX9 599 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 SLKQ9H2G2 1235 aaPredicted RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 TRIT1Q9H3H1 467 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 DMTF1Q9Y222 760 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 WBP11Q9Y2W2 641 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 U3KQE9 123 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 BRCA2P51587 3418 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 LRRC37A2A6NM11 1700 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 DOCK2Q92608 1830 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 SLC35F4A4IF30 521 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ADAM20O43506 726 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ERAL1O75616 437 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 SSBP05455 408 aaKnown RBP eCLIP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ATF3P18847 181 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 TNFSF4P23510 183 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 HSPA7P48741 367 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 RCAN1P53805 252 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 TRIM25Q14258 630 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 SEPT2Q15019 361 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 TARBP2Q15633 366 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRR16Q569H4 304 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 PITRM1Q5JRX3 1037 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 DCLRE1AQ6PJP8 1040 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 VHLLQ6RSH7 139 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 C15orf52Q6ZUT6 534 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 AHI1Q8N157 1196 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 EFHBQ8N7U6 833 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 GLIS1Q8NBF1 620 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 BVESQ8NE79 360 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 HTRA1Q92743 480 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ANAPC16Q96DE5 110 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 HS3ST6Q96QI5 342 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 PBX4Q9BYU1 374 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 WNT10AQ9GZT5 417 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CCL27Q9Y4X3 112 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 DCCP43146 1447 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 TMEM82A0PJX8 343 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CCDC188H7C350 402 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 J3QL48 77 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 PAPSS1O43252 624 aaPredicted RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 FKBP9O95302 570 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 OLFM2O95897 454 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 AOAHP28039 575 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CTCFP49711 727 aaPredicted RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 SESN3P58005 492 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CNN3Q15417 329 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CWF19L2Q2TBE0 894 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 DUSP28Q4G0W2 176 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 BROXQ5VW32 411 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 FKBP9P1Q75LS8 142 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZNF438Q7Z4V0 828 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRPF39Q86UA1 669 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZNF764Q96H86 408 aaPredicted RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 NR1H4Q96RI1 486 aaPredicted RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZFYVE1Q9HBF4 777 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 LUC7LQ9NQ29 371 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CRIM1Q9NZV1 1036 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 MYO5AQ9Y4I1 1855 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 POLR3AO14802 1390 aaPredicted RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZNF236Q9UL36 1845 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 TTC36A6NLP5 189 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 DHX16O60231 1041 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 XYLBO75191 536 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 GFPT2O94808 682 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 F9P00740 461 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 FBLN1P23142 703 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 PLA2G4AP47712 749 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 DCTN1Q14203 1278 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 C1orf229Q6ZS94 237 aaPredicted RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 WDR5BQ86VZ2 330 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 COLGALT2Q8IYK4 626 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 RILPL2Q969X0 211 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 PPP1R13BQ96KQ4 1090 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 MRGPRX2Q96LB1 330 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 GPR20Q99678 358 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 WDR18Q9BV38 432 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 NOL6Q9H6R4 1146 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 G6PC2Q9NQR9 355 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 SEMA5BQ9P283 1151 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 HDAC6Q9UBN7 1215 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 SBF1O95248 1867 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 CDRT15L2A8MXV6 281 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 NRG2O14511 850 aaPredicted RBP2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 ATP1A3P13637 1013 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 TIA1P31483 386 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 TOB1P50616 345 aaPredicted RBP2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRSS53Q2L4Q9 553 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 NUP54Q7Z3B4 507 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 RALYLQ86SE5 291 aaKnown RBP2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZBTB33Q86T24 672 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 RPAINQ86UA6 219 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM186BQ8IYM0 893 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 BRF1Q92994 677 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 PLPPR2Q96GM1 343 aa2.23□□□□□ -2.05
SMARCAD1-202ENST00000359052 PTCHD1Q96NR3 888 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms