RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 IRAK3Q9Y616 596 aa21.48■■□□□ 1.03
USP40-207ENST00000450940 LRRIQ4A6NIV6 560 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 B4GALT5O43286 388 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 RBM10P98175 930 aaKnown RBP21.47■■□□□ 1.03
USP40-207ENST00000450940 ATP2C1P98194 919 aaPredicted RBP21.47■■□□□ 1.03
USP40-207ENST00000450940 SLC27A1Q6PCB7 646 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 DTHD1Q6ZMT9 781 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 ZBP1Q9H171 429 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 C2orf40Q9H1Z8 148 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 BHMT2Q9H2M3 363 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 STK39Q9UEW8 545 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 SMC3Q9UQE7 1217 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.47■■□□□ 1.03
USP40-207ENST00000450940 ZMYM2Q9UBW7 1377 aa21.47■■□□□ 1.03
USP40-207ENST00000450940 ARL5CA6NH57 179 aa21.46■■□□□ 1.03
USP40-207ENST00000450940 ALDH2P05091 517 aa21.46■■□□□ 1.03
USP40-207ENST00000450940 SSTR3P32745 418 aaPredicted RBP21.46■■□□□ 1.03
USP40-207ENST00000450940 NAMPTP43490 491 aa21.46■■□□□ 1.03
USP40-207ENST00000450940 BMS1Q14692 1282 aaKnown RBP21.46■■□□□ 1.03
USP40-207ENST00000450940 ZBTB8OSQ8IWT0 167 aa21.46■■□□□ 1.03
USP40-207ENST00000450940 VPS52Q8N1B4 723 aa21.46■■□□□ 1.03
USP40-207ENST00000450940 SNX29Q8TEQ0 813 aa21.46■■□□□ 1.03
USP40-207ENST00000450940 MMTAG2Q9BU76 263 aaKnown RBP21.46■■□□□ 1.03
USP40-207ENST00000450940 DDX19AQ9NUU7 478 aaKnown RBP21.46■■□□□ 1.03
USP40-207ENST00000450940 DAXXQ9UER7 740 aaPredicted RBP21.46■■□□□ 1.03
USP40-207ENST00000450940 GIT1Q9Y2X7 761 aa21.46■■□□□ 1.03
USP40-207ENST00000450940 HES2Q9Y543 173 aa21.46■■□□□ 1.03
USP40-207ENST00000450940 H3BQV1 296 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 CXCL14O95715 111 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 POMCP01189 267 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 CTSAP10619 480 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 DSC1Q08554 894 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 CUL4AQ13619 759 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 GIT2Q14161 759 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 PPP2R5AQ15172 486 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 KRT79Q5XKE5 535 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 SUSD6Q92537 303 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 GAD1Q99259 594 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 POP1Q99575 1024 aaKnown RBP21.45■■□□□ 1.02
USP40-207ENST00000450940 VN1R3Q9BXE9 311 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 CCDC113Q9H0I3 377 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 GBP3Q9H0R5 595 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 S1PR5Q9H228 398 aa21.45■■□□□ 1.02
USP40-207ENST00000450940 PP2D1A8MPX8 630 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 EFEMP2O95967 443 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 SRGAP2BP0DMP2 458 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 HOXB8P17481 243 aaPredicted RBP21.44■■□□□ 1.02
USP40-207ENST00000450940 LARP1BQ659C4 914 aaKnown RBP21.44■■□□□ 1.02
USP40-207ENST00000450940 ANKRD54Q6NXT1 300 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 COLGALT2Q8IYK4 626 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 HACE1Q8IYU2 909 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 KCTD17Q8N5Z5 321 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 GSTCDQ8NEC7 633 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 KIFAP3Q92845 792 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 FAM193BQ96PV7 902 aaPredicted RBP21.44■■□□□ 1.02
USP40-207ENST00000450940 TRIM6Q9C030 488 aaPredicted RBP21.44■■□□□ 1.02
USP40-207ENST00000450940 NXF3Q9H4D5 531 aaKnown RBP21.44■■□□□ 1.02
USP40-207ENST00000450940 MIOSQ9NXC5 875 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 DNM3Q9UQ16 869 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 FAN1Q9Y2M0 1017 aa21.44■■□□□ 1.02
USP40-207ENST00000450940 USP15Q9Y4E8 981 aaPredicted RBP21.44■■□□□ 1.02
USP40-207ENST00000450940 TTLL13PA6NNM8 815 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 ACKR2O00590 384 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 NRP1O14786 923 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 CLASP2O75122 1294 aaKnown RBP21.43■■□□□ 1.02
USP40-207ENST00000450940 CDC25AP30304 524 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 MLH1P40692 756 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 MAPK6Q16659 721 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 HYIQ5T013 277 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 ARL6IP4Q66PJ3 421 aaKnown RBP21.43■■□□□ 1.02
USP40-207ENST00000450940 SYCE2Q6PIF2 218 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 CDR2LQ86X02 465 aaPredicted RBP21.43■■□□□ 1.02
USP40-207ENST00000450940 ZFP42Q96MM3 310 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 HCFC2Q9Y5Z7 792 aa21.43■■□□□ 1.02
USP40-207ENST00000450940 E9PMD0 336 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 GPR37L1O60883 481 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 NPTXRO95502 500 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 ALADP13716 330 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 EFNA5P52803 228 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 DEPTORQ8TB45 409 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 CASP10Q92851 521 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 IFT74Q96LB3 600 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 BACH2Q9BYV9 841 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 PDZD7Q9H5P4 517 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 C11orf16Q9NQ32 467 aa21.42■■□□□ 1.02
USP40-207ENST00000450940 N4BP3O15049 544 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 LILRB3O75022 631 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 PRKCBP05771 671 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 SCNN1GP51170 649 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 PRPF4BQ13523 1007 aaKnown RBP21.41■■□□□ 1.02
USP40-207ENST00000450940 KCNK18Q7Z418 384 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 RNF168Q8IYW5 571 aaPredicted RBP21.41■■□□□ 1.02
USP40-207ENST00000450940 DAW1Q8N136 415 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 AUTS2Q8WXX7 1259 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 POLD4Q9HCU8 107 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 MARCH5Q9NX47 278 aa21.41■■□□□ 1.02
USP40-207ENST00000450940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.4■■□□□ 1.02
USP40-207ENST00000450940 LOC730098B7Z3J9 87 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 EDN1P05305 212 aa21.4■■□□□ 1.02
USP40-207ENST00000450940 AKAP5P24588 427 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms