RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 NR1D1P20393 614 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 PPP1R2P41236 205 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 HIRAP54198 1017 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 ADCY2Q08462 1091 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 PPP2R5CQ13362 524 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 RNF10Q8N5U6 811 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 EPS8L3Q8TE67 593 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 ATP8B4Q8TF62 1192 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 MYOZ2Q9NPC6 264 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 OLFML3Q9NRN5 406 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 GNA14O95837 355 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 SCFD2Q8WU76 684 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 ITGBL1O95965 494 aaPredicted RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 FOSP01100 380 aaPredicted RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 CNGA1P29973 690 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 NPTX2P47972 431 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 SNRNP35Q16560 246 aaKnown RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 BTNL9Q6UXG8 535 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 CEP170P1Q96L14 293 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■□□□□ 8.2
ITSN1-211ENST00000399355 TAF1DQ9H5J8 278 aaPredicted RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 TBK1Q9UHD2 729 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 FAM169AQ9Y6X4 670 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 ACSL3O95573 720 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 LSP1P33241 339 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 KRT71Q3SY84 523 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 RNF187Q5TA31 235 aaPredicted RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 ZC3H3Q8IXZ2 948 aaKnown RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 BICD1Q96G01 975 aa12.67□□□□□ -0.38
ITSN1-211ENST00000399355 AGO4Q9HCK5 861 aaKnown RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
ITSN1-211ENST00000399355 HNRNPDLO14979 420 aaKnown RBP12.66□□□□□ -0.38
ITSN1-211ENST00000399355 ENTPD3O75355 529 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 IFT88Q13099 833 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 PGM5Q15124 567 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 SNRNP48Q6IEG0 339 aaKnown RBP12.66□□□□□ -0.38
ITSN1-211ENST00000399355 EPS8L1Q8TE68 723 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 HAPLN2Q9GZV7 340 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 SAE1Q9UBE0 346 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-211ENST00000399355 R3HDM2Q9Y2K5 976 aaKnown RBP12.66□□□□□ -0.38
ITSN1-211ENST00000399355 SZT2Q5T011 3432 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 MXI1P50539 228 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 ORC2Q13416 577 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-211ENST00000399355 GJC2Q5T442 439 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-211ENST00000399355 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 AGPAT1Q99943 283 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 AMFRQ9UKV5 643 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 STXBP5LQ9Y2K9 1186 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 EIF3HO15372 352 aaKnown RBP eCLIP12.66□□□□□ -0.384e-6■■■□□ 17.2
ITSN1-211ENST00000399355 PAK2Q13177 524 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 SMAD1Q15797 465 aaKnown RBP12.66□□□□□ -0.38
ITSN1-211ENST00000399355 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 ZNF516Q92618 1163 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 WRNIP1Q96S55 665 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 SH3GL2Q99962 352 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 STK33Q9BYT3 514 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 DEFB129Q9H1M3 183 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 TJP2Q9UDY2 1190 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 TMEM59LQ9UK28 342 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 KIAA1217Q5T5P2 1943 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 CD58P19256 250 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 RPL21P46778 160 aaKnown RBP12.66□□□□□ -0.38
ITSN1-211ENST00000399355 MMP14P50281 582 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 QSER1Q2KHR3 1735 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 PRELID2Q8N945 189 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 GLIS1Q8NBF1 620 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 RPGRIP1Q96KN7 1286 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 ACBD3Q9H3P7 528 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 CHST7Q9NS84 486 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 HACL1Q9UJ83 578 aa12.66□□□□□ -0.38
ITSN1-211ENST00000399355 POLR2AP24928 1970 aaKnown RBP12.65□□□□□ -0.38
ITSN1-211ENST00000399355 QARSP47897 775 aaKnown RBP12.65□□□□□ -0.38
ITSN1-211ENST00000399355 NLRP11P59045 1033 aaKnown RBP12.65□□□□□ -0.38
ITSN1-211ENST00000399355 SLC29A2Q14542 456 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 KAZNQ674X7 775 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 SCARA5Q6ZMJ2 495 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 ZBTB33Q86T24 672 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 ZNF653Q96CK0 615 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 HES6Q96HZ4 224 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 TEPSINQ96N21 525 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 NUP85Q9BW27 656 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 MRPL11Q9Y3B7 192 aaKnown RBP12.65□□□□□ -0.38
ITSN1-211ENST00000399355 ATRNL1Q5VV63 1379 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 PIK3CDO00329 1044 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 SPOPO43791 374 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 BANF1O75531 89 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 PPP1R37O75864 691 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 PRLRP16471 622 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 CCDC50Q8IVM0 306 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
ITSN1-211ENST00000399355 VIPAS39Q9H9C1 493 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
ITSN1-211ENST00000399355 DMAC2Q9NW81 257 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms