RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 SLC7A14Q8TBB6 771 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 LINC00476Q8WZB0 136 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 GPATCH3Q96I76 525 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 FAM193BQ96PV7 902 aaPredicted RBP4.45□□□□□ -1.7
VPS8-228ENST00000628962 PDCD2LQ9BRP1 358 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 ENKD1Q9H0I2 346 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 SLKQ9H2G2 1235 aaPredicted RBP4.45□□□□□ -1.7
VPS8-228ENST00000628962 ANKFY1Q9P2R3 1169 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 DKK2Q9UBU2 259 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 DNAI1Q9UI46 699 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 MRPS23Q9Y3D9 190 aaKnown RBP4.45□□□□□ -1.7
VPS8-228ENST00000628962 INSL6Q9Y581 213 aa4.45□□□□□ -1.7
VPS8-228ENST00000628962 DAPK3O43293 454 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 DIAPH1O60610 1272 aaKnown RBP4.44□□□□□ -1.7
VPS8-228ENST00000628962 RAB11FIP3O75154 756 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 CDC45O75419 566 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 HNRNPLP14866 589 aaKnown RBP eCLIP4.44□□□□□ -1.7
VPS8-228ENST00000628962 KCNA6P17658 529 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 AVPR1BP47901 424 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 FAM214AQ32MH5 1076 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 MTERF2Q49AM1 385 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 TRIM61Q5EBN2 209 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 ZNF362Q5T0B9 420 aaPredicted RBP4.44□□□□□ -1.7
VPS8-228ENST00000628962 IQSEC1Q6DN90 963 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 SLFN12LQ6IEE8 588 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 LILRA3Q8N6C8 439 aaPredicted RBP4.44□□□□□ -1.7
VPS8-228ENST00000628962 RNPC3Q96LT9 517 aaKnown RBP4.44□□□□□ -1.7
VPS8-228ENST00000628962 COQ10AQ96MF6 247 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 EIF2B4Q9UI10 523 aaKnown RBP4.44□□□□□ -1.7
VPS8-228ENST00000628962 FRMD4BQ9Y2L6 1034 aa4.44□□□□□ -1.7
VPS8-228ENST00000628962 NOP58Q9Y2X3 529 aaKnown RBP4.44□□□□□ -1.7
VPS8-228ENST00000628962 FAM221BA6H8Z2 402 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 PROB1E7EW31 1015 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 PPP1R12AO14974 1030 aaPredicted RBP4.43□□□□□ -1.7
VPS8-228ENST00000628962 HOXA3O43365 443 aaPredicted RBP4.43□□□□□ -1.7
VPS8-228ENST00000628962 MARCH6O60337 910 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 EFCAB14O75071 495 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 NPTXRO95502 500 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 PTH2RP49190 550 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 RASA3Q14644 834 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 VPS72Q15906 364 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 TAF7LQ5H9L4 462 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 ZC3H12BQ5HYM0 836 aaKnown RBP4.43□□□□□ -1.7
VPS8-228ENST00000628962 CYB5RLQ6IPT4 315 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 ABHD17CQ6PCB6 329 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 LCORLQ8N3X6 602 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 C2orf69Q8N8R5 385 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 OR52N2Q8NGI0 321 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 SH3TC2Q8TF17 1288 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 CPPED1Q9BRF8 314 aaPredicted RBP4.43□□□□□ -1.7
VPS8-228ENST00000628962 NDC1Q9BTX1 674 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 BOCQ9BWV1 1114 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 CHMP4AQ9BY43 222 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 CPEB1Q9BZB8 566 aaKnown RBP4.43□□□□□ -1.7
VPS8-228ENST00000628962 RSAD1Q9HA92 442 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 ALG13Q9NP73 1137 aaKnown RBP4.43□□□□□ -1.7
VPS8-228ENST00000628962 COL4A3BPQ9Y5P4 624 aa4.43□□□□□ -1.7
VPS8-228ENST00000628962 UBA6A0AVT1 1052 aaPredicted RBP4.42□□□□□ -1.7
VPS8-228ENST00000628962 DVL2O14641 736 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 KCNQ2O43526 872 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 DNAJC6O75061 913 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 CFBP00751 764 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 APOBEC3AP31941 199 aaPredicted RBP4.42□□□□□ -1.7
VPS8-228ENST00000628962 SEC24CP53992 1094 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 FOXI1Q12951 378 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 TMEM177Q53S58 311 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 TTC38Q5R3I4 469 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 MICALCLQ6ZW33 695 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 NOL8Q76FK4 1167 aaKnown RBP4.42□□□□□ -1.7
VPS8-228ENST00000628962 SIMC1Q8NDZ2 872 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 APPBP2Q92624 585 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 NELL1Q92832 810 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 SCLYQ96I15 445 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 MAGEB10Q96LZ2 347 aaPredicted RBP4.42□□□□□ -1.7
VPS8-228ENST00000628962 POLR3GLQ9BT43 218 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 LRFN3Q9BTN0 628 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 BRINP2Q9C0B6 783 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 SPC25Q9HBM1 224 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 METTL14Q9HCE5 456 aaKnown RBP4.42□□□□□ -1.7
VPS8-228ENST00000628962 FANCLQ9NW38 375 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 NDOR1Q9UHB4 597 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 NESP48681 1621 aa4.42□□□□□ -1.7
VPS8-228ENST00000628962 RNASET2O00584 256 aaKnown RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 BMPR1AP36894 532 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 ELLP55199 621 aaPredicted RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 BCAR1P56945 870 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 ERCC6LQ2NKX8 1250 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 GDF7Q7Z4P5 450 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 HDGFL2Q7Z4V5 671 aaPredicted RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 BRAPQ7Z569 592 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 HOMER1Q86YM7 354 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 CMTR2Q8IYT2 770 aaKnown RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 BOLLQ8N9W6 283 aaKnown RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 GLB1L3Q8NCI6 653 aaPredicted RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 DCLRE1CQ96SD1 692 aaKnown RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 DNAJC7Q99615 494 aa4.41□□□□□ -1.7
VPS8-228ENST00000628962 LSM14BQ9BX40 385 aaKnown RBP4.41□□□□□ -1.7
VPS8-228ENST00000628962 OSBPL6Q9BZF3 934 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms