RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DDX53Q86TM3 631 aaKnown RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 KSR1Q8IVT5 923 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 DIS3L2Q8IYB7 885 aaKnown RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 NECAB1Q8N987 351 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 ZNF579Q8NAF0 562 aaKnown RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 URGCPQ8TCY9 931 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 EDAQ92838 391 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 TMEM143Q96AN5 459 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 IGSF21Q96ID5 467 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 DYDC2Q96IM9 177 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 NECTIN4Q96NY8 510 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 MTMR9Q96QG7 549 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 MTRQ99707 1265 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 EIF2AK1Q9BQI3 630 aaKnown RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 LLPHQ9BRT6 129 aaKnown RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 TMEM175Q9BSA9 504 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 NFKBIZQ9BYH8 718 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 ZBP1Q9H171 429 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 NRDE2Q9H7Z3 1164 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 TTC12Q9H892 705 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 UBN1Q9NPG3 1134 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 XPNPEP1Q9NQW7 623 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 TBC1D13Q9NVG8 400 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 RGL1Q9NZL6 768 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 DAXXQ9UER7 740 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-203ENST00000554074 MUTYHQ9UIF7 546 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 PCDHB2Q9Y5E7 798 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 DOCK6Q96HP0 2047 aa7.37□□□□□ -1.23
SLIRP-203ENST00000554074 PDCD11Q14690 1871 aaKnown RBP7.36□□□□□ -1.23
SLIRP-203ENST00000554074 HIDE1A8MVS5 230 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 BTBD18B2RXH4 712 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 CLASP2O75122 1294 aaKnown RBP7.36□□□□□ -1.23
SLIRP-203ENST00000554074 ZC3H11AO75152 810 aaKnown RBP eCLIP7.36□□□□□ -1.23
SLIRP-203ENST00000554074 GALTP07902 379 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 SRGAP2CP0DJJ0 459 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 NCLP19338 710 aaKnown RBP7.36□□□□□ -1.23
SLIRP-203ENST00000554074 HOXA11P31270 313 aaPredicted RBP7.36□□□□□ -1.23
SLIRP-203ENST00000554074 ARL2P36404 184 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 TECP42680 631 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 CYP4A11Q02928 519 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 UBXN11Q5T124 520 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 NOTUMQ6P988 496 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 POTEHQ6S545 545 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 AGMOQ6ZNB7 445 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 TPH2Q8IWU9 490 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 VPS52Q8N1B4 723 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 RNF149Q8NC42 400 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 LPPQ93052 612 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 MFSD14AQ96MC6 490 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 ADAM7Q9H2U9 754 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 MINDY3Q9H8M7 445 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 RSAD1Q9HA92 442 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 TUFT1Q9NNX1 390 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 DZANK1Q9NVP4 752 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 HCFC2Q9Y5Z7 792 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 VWA8A3KMH1 1905 aa7.36□□□□□ -1.23
SLIRP-203ENST00000554074 MEIS3P2A8K0S8 358 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 NT5C1B-RDH14C9J2C7 533 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 TSPAN1O60635 241 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 JAK2O60674 1132 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 ERLIN2O94905 339 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 CXCL14O95715 111 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 C1RP00736 705 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 MUTP22033 750 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 MTHFRP42898 656 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 SLC11A1P49279 550 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 RARRES1P49788 294 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 ZXDAP98168 799 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 RBM10P98175 930 aaKnown RBP7.35□□□□□ -1.23
SLIRP-203ENST00000554074 RNASELQ05823 741 aaKnown RBP7.35□□□□□ -1.23
SLIRP-203ENST00000554074 NCBP1Q09161 790 aaKnown RBP7.35□□□□□ -1.23
SLIRP-203ENST00000554074 ST3GAL1Q11201 340 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 SAFBQ15424 915 aaKnown RBP eCLIP7.35□□□□□ -1.23
SLIRP-203ENST00000554074 CES5AQ6NT32 575 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 TRIM67Q6ZTA4 783 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 PPFIBP1Q86W92 1011 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 TMEM173Q86WV6 379 aaPredicted RBP7.35□□□□□ -1.23
SLIRP-203ENST00000554074 SLC22A17Q8WUG5 538 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 POLR3CQ9BUI4 534 aaPredicted RBP7.35□□□□□ -1.23
SLIRP-203ENST00000554074 CSRNP2Q9H175 543 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 FOXP1Q9H334 677 aaPredicted RBP7.35□□□□□ -1.23
SLIRP-203ENST00000554074 DBR1Q9UK59 544 aaKnown RBP7.35□□□□□ -1.23
SLIRP-203ENST00000554074 LIMCH1Q9UPQ0 1083 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 INPP5FQ9Y2H2 1132 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 NR2E1Q9Y466 385 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 CACNA1HO95180 2353 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 WDFY4Q6ZS81 3184 aa7.35□□□□□ -1.23
SLIRP-203ENST00000554074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 TMEM221A6NGB7 291 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 POTEMA6NI47 508 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 INO80B-WBP1J3KQ70 363 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 M0R296 226 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 WNT7AO00755 349 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 ZBTB39O15060 712 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 DTNBO60941 627 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 LILRB3O75022 631 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 DDHD2O94830 711 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 EFEMP2O95967 443 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 ALDH2P05091 517 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 OR52Z1P0C646 297 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms