RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CISD2Q8N5K1 135 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 ATL2Q8NHH9 583 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 LARP4BQ92615 738 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 ZNF669Q96BR6 464 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 GPR101Q96P66 508 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 IPO9Q96P70 1041 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 HERPUD2Q9BSE4 406 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 OR10A5Q9H207 317 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 NELFAQ9H3P2 528 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 CAAP1Q9H8G2 361 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 AGO3Q9H9G7 860 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 PFDN2Q9UHV9 154 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 EVLQ9UI08 416 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 THRAP3Q9Y2W1 955 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 GIT1Q9Y2X7 761 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 REXO2Q9Y3B8 237 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 SCDO00767 359 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 GSTA4O15217 222 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 TCEA3O75764 348 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 RPN1P04843 607 aaKnown RBP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 HNRNPCP07910 306 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 NAT1P18440 290 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 MAKP20794 623 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 CCT5P48643 541 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 GEMIN4P57678 1058 aaKnown RBP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 NANOS3P60323 173 aaKnown RBP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 PSMC1P62191 440 aaKnown RBP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 HGFACQ04756 655 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 ITKQ08881 620 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 RASA3Q14644 834 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 KIF22Q14807 665 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 SLC4A8Q2Y0W8 1093 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 GRAMD4Q6IC98 578 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 MMS22LQ6ZRQ5 1243 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 ADGRE4PQ86SQ3 457 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 PASD1Q8IV76 773 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 ZC3H7AQ8IWR0 971 aaKnown RBP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 CHCHD4Q8N4Q1 142 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 THAP3Q8WTV1 239 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 CLIP3Q96DZ5 547 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 PRDM11Q9NQV5 511 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 AURKAIP1Q9NWT8 199 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 CEP72Q9P209 647 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 HDAC9Q9UKV0 1011 aa4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 CTDP1Q9Y5B0 961 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P15-201ENST00000507326 PRAMEF22A3QJZ6 481 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 PABPN1LA6NDY0 278 aaKnown RBP4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 PDPK1O15530 556 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 CRTAMO95727 393 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 SCGB1D2O95969 90 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 FAM200BP0CF97 657 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 PEX19P40855 299 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 LACTBP83111 547 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 SSRP1Q08945 709 aaKnown RBP4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 CRHR2Q13324 411 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 RIN1Q13671 783 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 MTERF2Q49AM1 385 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 TM4SF20Q53R12 229 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 HYIQ5T013 277 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 FSTL4Q6MZW2 842 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 ZNF627Q7L945 461 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 ANKRD23Q86SG2 305 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 RPAINQ86UA6 219 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 ZNF575Q86XF7 245 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 TMPRSS6Q8IU80 811 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 THEMISQ8N1K5 641 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 ZBTB38Q8NAP3 1195 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 HIPK4Q8NE63 616 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 VPS37AQ8NEZ2 397 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 ASB15Q8WXK1 588 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 SKA1Q96BD8 255 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 MFSD3Q96ES6 412 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 GBP4Q96PP9 640 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 MYCBPQ99417 103 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 DNAJC7Q99615 494 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 ZNF703Q9H7S9 590 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 SLC2A4RGQ9NR83 387 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 PARPBPQ9NWS1 579 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 USP25Q9UHP3 1055 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 ODF2LQ9ULJ1 636 aa4.27□□□□□ -1.73
HMGB3P15-201ENST00000507326 A0A1W2PRQ8 180 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 RASSF10A6NK89 507 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 PRRT4C9JH25 899 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 FOXP2O15409 715 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 CYP27B1O15528 508 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 ORC4O43929 436 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 DIAPH1O60610 1272 aaKnown RBP4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 GUCY2FP51841 1108 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 GABREP78334 506 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 RRP1BQ14684 758 aaKnown RBP4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 ACAP1Q15027 740 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 C2orf27AQ580R0 203 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 NOSTRINQ8IVI9 506 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 HSCBQ8IWL3 235 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 DNAJC10Q8IXB1 793 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 ACRBPQ8NEB7 543 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 ERP27Q96DN0 273 aa4.26□□□□□ -1.73
HMGB3P15-201ENST00000507326 MPP4Q96JB8 637 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms