RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PRR20AP86496 221 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PPARAQ07869 468 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 MAP3K12Q12852 859 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 MALLQ13021 153 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 SLC12A1Q13621 1099 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 SPARCL1Q14515 664 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PLCL1Q15111 1095 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 NOMO1Q15155 1222 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 MUM1L1Q5H9M0 696 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 FIGNQ5HY92 759 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 FBXO47Q5MNV8 452 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 TRAPPC3LQ5T215 181 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 SFRP5Q5T4F7 317 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 FAM205BPQ63HN1 556 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 SULT6B1Q6IMI4 303 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 TRIM67Q6ZTA4 783 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 HEATR3Q7Z4Q2 680 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 TTC7BQ86TV6 843 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 SESTD1Q86VW0 696 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 RHOT1Q8IXI2 618 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 ZNF655Q8N720 491 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 ATP11CQ8NB49 1132 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 CCDC150Q8NCX0 1101 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 FLCNQ8NFG4 579 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PLBD2Q8NHP8 589 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 IL31RAQ8NI17 732 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 AFG1LQ8WV93 481 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 NANOS1Q8WY41 292 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 RSPH1Q8WYR4 309 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 FATE1Q969F0 183 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 C18orf8Q96DM3 657 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 RSRC1Q96IZ7 334 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PTCHD1Q96NR3 888 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 C7orf25Q9BPX7 421 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 STK33Q9BYT3 514 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 CCDC68Q9H2F9 335 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 EPB41L1Q9H4G0 881 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 AP5S1Q9NUS5 200 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 NFKBIL1Q9UBC1 381 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 SNX5Q9Y5X3 404 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 B3GALT1Q9Y5Z6 326 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 CFAP20Q9Y6A4 193 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 TCRBV5S4A2TA0A5A2 114 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 UBA6A0AVT1 1052 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 C7orf72A4D263 438 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 ISM1B1AKI9 464 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 H7BY64 318 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 NPC1O15118 1278 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 FRS3O43559 492 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 CLASP2O75122 1294 aaKnown RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 PRPF6O94906 941 aaKnown RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 PCDH8O95206 1070 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 DNTTP04053 509 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZSCAN22P10073 491 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 VEGFAP15692 232 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 ALOX15P16050 662 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 RXRAP19793 462 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 STAT1P42224 750 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 ARF3P61204 181 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 ARF1P84077 181 aaKnown RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 MBTPS1Q14703 1052 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLC14A2Q15849 920 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 RILPL1Q5EBL4 403 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 C3orf38Q5JPI3 329 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 TTC38Q5R3I4 469 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZBTB41Q5SVQ8 909 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 BTBD8Q5XKL5 378 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 BEND5Q7L4P6 421 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 MOGAT3Q86VF5 341 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 RBM12BQ8IXT5 1001 aaKnown RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 NDUFAF2Q8N183 169 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 ANKRD52Q8NB46 1076 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 DAGLBQ8NCG7 672 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 SMG8Q8ND04 991 aaKnown RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 C3orf20Q8ND61 904 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 IPO4Q8TEX9 1081 aaKnown RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 TSPEARQ8WU66 669 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 HTRA1Q92743 480 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 DLG3Q92796 817 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 RAB24Q969Q5 203 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 RNF166Q96A37 237 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 LRRC46Q96FV0 321 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 RADILQ96JH8 1075 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 CLPTM1LQ96KA5 538 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 SPATA17Q96L03 361 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 C16orf92Q96LL3 132 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 YIPF2Q9BWQ6 316 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 PRDM12Q9H4Q4 367 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 PREBQ9HCU5 417 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 SERHLQ9NQF3 203 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 PRDM5Q9NQX1 630 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 KCND1Q9NSA2 647 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 NSMCE4AQ9NXX6 385 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 CFDP1Q9UEE9 299 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 ABCF2Q9UG63 623 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 PCDHA6Q9UN73 950 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 MAN2B2Q9Y2E5 1009 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 NUB1Q9Y5A7 615 aa4.15□□□□□ -1.75
HMGB1P22-201ENST00000505315 C22orf46C9J442 243 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 SYT5O00445 386 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms