RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ARHGEF18Q6ZSZ5 1173 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 PHC3Q8NDX5 983 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 PDZD8Q8NEN9 1154 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 XPO6Q96QU8 1125 aaKnown RBP4.95□□□□□ -1.62
CCNL1-215ENST00000474539 NUDCD1Q96RS6 583 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 PLIN2Q99541 437 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 RNF208Q9H0X6 261 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 RBSNQ9H1K0 784 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 VCXQ9H320 206 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 ARFGAP3Q9NP61 516 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 NSMCE4AQ9NXX6 385 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 MAD1L1Q9Y6D9 718 aa4.95□□□□□ -1.62
CCNL1-215ENST00000474539 CNTNAP2Q9UHC6 1331 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 CFAP69A5D8W1 941 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 GOLGA8TH3BQL2 631 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 PDXKO00764 312 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 PPP1R12AO14974 1030 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ZC3H11AO75152 810 aaKnown RBP eCLIP4.94□□□□□ -1.621e-8■■■□□ 17.1
CCNL1-215ENST00000474539 PFKFB1P16118 471 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 SDC4P31431 198 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 HPDP32754 393 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 IFNAR2P48551 515 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 SLC11A2P49281 568 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 NFIAQ12857 509 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ARHGAP44Q17R89 818 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 EFHC1Q5JVL4 640 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 C8orf74Q6P047 294 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 SDCCAG8Q86SQ7 713 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 CCDC105Q8IYK2 499 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 U2AF1L4Q8WU68 220 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 SCFD1Q8WVM8 642 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 SYMPKQ92797 1274 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 CCDC127Q96BQ5 260 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 DYNLL2Q96FJ2 89 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 KIF12Q96FN5 646 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 IFT43Q96FT9 208 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 PANX2Q96RD6 677 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 SLC7A5P2Q9GIP4 190 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 DRC3Q9H069 523 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 PUS7LQ9H0K6 701 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 DNAJC17Q9NVM6 304 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 AGO2Q9UKV8 859 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 NCKAP1Q9Y2A7 1128 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 TACC3Q9Y6A5 838 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 FAM208AQ9UK61 1670 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF609O15014 1411 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 H7C0C1 242 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 MAGEC1O60732 1142 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 CIB2O75838 187 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ALDH1A2O94788 518 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 RTN3O95197 1032 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 CYP21A2P08686 494 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 AKR1B1P15121 316 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 TAC1P20366 129 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ATP5OP48047 213 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 HARS2P49590 506 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 PEX3P56589 373 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 STX17P56962 302 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 KIF23Q02241 960 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF827Q17R98 1081 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 WHAMMP3Q1A5X7 153 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 PCNX4Q63HM2 1172 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 CASC4Q6P4E1 433 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 EEPD1Q7L9B9 569 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 FRMD5Q7Z6J6 570 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 RFX6Q8HWS3 928 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 SCN4BQ8IWT1 228 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 FBF1Q8TES7 1133 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 WNK4Q96J92 1243 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF512Q96ME7 567 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 MYL10Q9BUA6 226 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 SPATA16Q9BXB7 569 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 IFIH1Q9BYX4 1025 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 FRMD8P1Q9BZ68 369 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.94□□□□□ -1.623e-6■■■■□ 25
CCNL1-215ENST00000474539 DNAJC25Q9H1X3 360 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 MFSD1Q9H3U5 465 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ZDHHC4Q9NPG8 344 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 IRAK4Q9NWZ3 460 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 USTQ9Y2C2 406 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ATP11BQ9Y2G3 1177 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF510Q9Y2H8 683 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 PXDNQ92626 1479 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 KANSL1LA0AUZ9 987 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 KIF3CO14782 793 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 YWHABP31946 246 aaKnown RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 NAMPTP43490 491 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 MXRA7P84157 204 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 RASSF7Q02833 373 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 KCNB1Q14721 858 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 ZSCAN23Q3MJ62 389 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 KRT12Q99456 494 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 LXNQ9BS40 222 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 FRMD8Q9BZ67 464 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-215ENST00000474539 CCSER1Q9C0I3 900 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 CHST12Q9NRB3 414 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 IFNKQ9P0W0 207 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 KIF20BQ96Q89 1820 aa4.94□□□□□ -1.62
CCNL1-215ENST00000474539 LRRIQ3A6PVS8 624 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 GSG1L2A8MUP6 293 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms