RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 TNFRSF10AO00220 468 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 ABLIM1O14639 778 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 PSMA7O14818 248 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 MYL3P08590 195 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 C6orf222P0C671 652 aaPredicted RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 RARBP10826 455 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 KLRC1P26715 233 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 CNGA1P29973 690 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 LBX1P52954 281 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 POLGP54098 1239 aaPredicted RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 PEX3P56589 373 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 ZNF200P98182 395 aaPredicted RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 TBC1D8BQ0IIM8 1120 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 PPFIA1Q13136 1202 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 PKN2Q16513 984 aaKnown RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 KIAA0753Q2KHM9 967 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 L1TD1Q5T7N2 865 aaKnown RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 MTHFD1LQ6UB35 978 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 CXCL17Q6UXB2 119 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 TRIM67Q6ZTA4 783 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 HAUS6Q7Z4H7 955 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 CTU1Q7Z7A3 348 aaKnown RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 GPIHBP1Q8IV16 184 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 NELFCDQ8IXH7 590 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 FAM178BQ8IXR5 827 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 WNT8BQ93098 351 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 CCDC47Q96A33 483 aaKnown RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 PDLIM2Q96JY6 352 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 CCDC43Q96MW1 224 aaKnown RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 GTPBP4Q9BZE4 634 aaKnown RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 NAT10Q9H0A0 1025 aaKnown RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.53□□□□□ -1.2
CPS1-202ENST00000417946 MRPL44Q9H9J2 332 aaKnown RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 C17orf75Q9HAS0 396 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 PAK6Q9NQU5 681 aaPredicted RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 SETD4Q9NVD3 440 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 DMAC2Q9NW81 257 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 DACH1Q9UI36 760 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 ZNF215Q9UL58 517 aaPredicted RBP7.53□□□□□ -1.2
CPS1-202ENST00000417946 TRAF3IP3Q9Y228 551 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 ANKRD63C9JTQ0 380 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 GDF9O60383 454 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 GCNT3O95395 438 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 PIGRP01833 764 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 ASGR1P07306 291 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 ADSSP30520 456 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 PPP1R2P41236 205 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 NAMPTP43490 491 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 IGBP1P78318 339 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 LRRC63Q05C16 580 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 LAMTOR4Q0VGL1 99 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 MTFR1Q15390 333 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 KCNA10Q16322 511 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 NFIL3Q16649 462 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 AMHR2Q16671 573 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 KNOP1Q1ED39 458 aaKnown RBP7.52□□□□□ -1.21
CPS1-202ENST00000417946 EDRF1Q3B7T1 1238 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 HSP90AA4PQ58FG1 418 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 GNASQ5JWF2 1037 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 IER5Q5VY09 327 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 SESTD1Q86VW0 696 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 MAP4K3Q8IVH8 894 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 KIAA0319LQ8IZA0 1049 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 ZSWIM2Q8NEG5 633 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 TMEM174Q8WUU8 243 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 PRPF31Q8WWY3 499 aaKnown RBP7.52□□□□□ -1.21
CPS1-202ENST00000417946 HVCN1Q96D96 273 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 EEF2KMTQ96G04 330 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 MTG1Q9BT17 334 aaPredicted RBP7.52□□□□□ -1.21
CPS1-202ENST00000417946 HAPLN2Q9GZV7 340 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 MINDY3Q9H8M7 445 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 IFT122Q9HBG6 1241 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 AGPAT3Q9NRZ7 376 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 TYW1Q9NV66 732 aaKnown RBP7.52□□□□□ -1.21
CPS1-202ENST00000417946 LARSQ9P2J5 1176 aaKnown RBP7.52□□□□□ -1.21
CPS1-202ENST00000417946 HDAC6Q9UBN7 1215 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 LIMA1Q9UHB6 759 aaKnown RBP7.52□□□□□ -1.21
CPS1-202ENST00000417946 USP20Q9Y2K6 914 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 KIAA0100Q14667 2235 aaKnown RBP7.52□□□□□ -1.21
CPS1-202ENST00000417946 CENPFP49454 3210 aa7.52□□□□□ -1.21
CPS1-202ENST00000417946 DENND3A2RUS2 1198 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 LRRC10BA6NIK2 292 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 SMTNL1A8MU46 457 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 PDXKO00764 312 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 MAGEB2O15479 319 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 TREHO43280 583 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 GAS2O43903 313 aaKnown RBP7.51□□□□□ -1.21
CPS1-202ENST00000417946 FAM189A1O60320 539 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 MSCO60682 206 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 KPNA6O60684 536 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 NR3C1P04150 777 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 IQCF3P0C7M6 154 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 GCGRP47871 477 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 CASP4P49662 377 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 ZNF75DP51815 510 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 ACLYP53396 1101 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 MCCD1P59942 119 aaPredicted RBP7.51□□□□□ -1.21
CPS1-202ENST00000417946 FANCCQ00597 558 aa7.51□□□□□ -1.21
CPS1-202ENST00000417946 MBTD1Q05BQ5 628 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms