RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SRRM1Q8IYB3 904 aaKnown RBP8.96□□□□□ -0.97
VPS36-201ENST00000378060 MMGT1Q8N4V1 131 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 GIMAP8Q8ND71 665 aaPredicted RBP8.96□□□□□ -0.97
VPS36-201ENST00000378060 SAAL1Q96ER3 474 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 MASTLQ96GX5 879 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 MED10Q9BTT4 135 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 KLC4Q9NSK0 619 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 SLC5A4Q9NY91 659 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 POTEB3A0JP26 581 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 POTECB2RU33 542 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 INO80B-WBP1J3KQ70 363 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 NPR1P16066 1061 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 ANTXR2P58335 489 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 TFAMQ00059 246 aaKnown RBP8.96□□□□□ -0.97
VPS36-201ENST00000378060 GABPAQ06546 454 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 SBK1Q52WX2 424 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 POTEBQ6S5H4 581 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 ARHGAP27Q6ZUM4 889 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 REXO1L1PQ8IX06 675 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 CEP95Q96GE4 821 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 DDX27Q96GQ7 796 aaKnown RBP8.96□□□□□ -0.97
VPS36-201ENST00000378060 INO80BQ9C086 356 aaPredicted RBP8.96□□□□□ -0.97
VPS36-201ENST00000378060 SEPT10Q9P0V9 454 aa8.96□□□□□ -0.97
VPS36-201ENST00000378060 AGTP01019 485 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 FTLP02792 175 aaPredicted RBP8.96□□□□□ -0.98
VPS36-201ENST00000378060 GYPCP04921 128 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 CALB1P05937 261 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 CCND2P30279 289 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 PEX3P56589 373 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 TBC1D22BQ9NU19 505 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 HPCAL4Q9UM19 191 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 PACSIN2Q9UNF0 486 aaPredicted RBP8.96□□□□□ -0.98
VPS36-201ENST00000378060 DLEC1Q9Y238 1755 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 COPEO14579 308 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 NMT2O60551 498 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 ZBED1O96006 694 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 FCER1AP12319 257 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 SOX5P35711 763 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 DYNLT1P63172 113 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 RCSD1Q6JBY9 416 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 CCDC137Q6PK04 289 aaKnown RBP8.96□□□□□ -0.98
VPS36-201ENST00000378060 TRIM72Q6ZMU5 477 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 RAPH1Q70E73 1250 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 KSR1Q8IVT5 923 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 ST13P4Q8IZP2 240 aaPredicted RBP8.96□□□□□ -0.98
VPS36-201ENST00000378060 ZNF564Q8TBZ8 553 aaPredicted RBP8.96□□□□□ -0.98
VPS36-201ENST00000378060 PIGOQ8TEQ8 1089 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 CCT8L2Q96SF2 557 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 MAP3K14Q99558 947 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 POLLQ9UGP5 575 aa8.96□□□□□ -0.98
VPS36-201ENST00000378060 MROH7-TTC4A0A0A0MT08 1334 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 SFI1A8K8P3 1242 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 MYBL1P10243 752 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 VAMP7P51809 220 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 EDRF1Q3B7T1 1238 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 AGBL2Q5U5Z8 902 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 C12orf60Q5U649 245 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 WDR93Q6P2C0 686 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 TRIM59Q8IWR1 403 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 ZNF710Q8N1W2 664 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 FAM149B1Q96BN6 582 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 RNPC3Q96LT9 517 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 ERGIC2Q96RQ1 377 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 NACA2Q9H009 215 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 GINM1Q9NU53 330 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 BAG5Q9UL15 447 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 STRIP2Q9ULQ0 834 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 MYO5AQ9Y4I1 1855 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 GOLGA8CPA6NN73 597 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 SPECC1L-ADORA2AF8WAN1 911 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 HNRNPCL1O60812 293 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 TOM1L1O75674 476 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 HOXA13P31271 388 aaPredicted RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 GCLMP48507 274 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 IRAK1P51617 712 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 FAM47EQ6ZV65 393 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 SYDE1Q6ZW31 735 aaPredicted RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 DNAAF3Q8N9W5 541 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 TSC22D3Q99576 134 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 KLC2Q9H0B6 622 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 INTS2Q9H0H0 1204 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 CD209Q9NNX6 404 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 AMACRQ9UHK6 382 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 BCS1LQ9Y276 419 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 BRCA1P38398 1863 aaKnown RBP8.95□□□□□ -0.98
VPS36-201ENST00000378060 DUOX1Q9NRD9 1551 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 SALL3Q9BXA9 1300 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 WDR91A4D1P6 747 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 GOLGA8IPA6NC78 632 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 GOLGA8JA6NMD2 632 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L15C9J2P7 530 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L13C9JLJ4 530 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L11C9JVI0 530 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L18D6R9N7 530 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L22D6RA61 530 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L17D6RBQ6 530 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L19D6RCP7 530 aa8.95□□□□□ -0.98
VPS36-201ENST00000378060 USP17L20D6RJB6 530 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms