RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 RHOT1Q8IXI2 618 aa16.96■□□□□ 0.31
COL17A1-202ENST00000369733 DTX3LQ8TDB6 740 aa16.96■□□□□ 0.31
COL17A1-202ENST00000369733 SLC26A7Q8TE54 656 aa16.96■□□□□ 0.31
COL17A1-202ENST00000369733 MAP3K14Q99558 947 aa16.96■□□□□ 0.31
COL17A1-202ENST00000369733 CELF4Q9BZC1 486 aaKnown RBP16.96■□□□□ 0.31
COL17A1-202ENST00000369733 SENP1Q9P0U3 644 aa16.96■□□□□ 0.31
COL17A1-202ENST00000369733 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.3
COL17A1-202ENST00000369733 KRT10P13645 584 aa16.96■□□□□ 0.3
COL17A1-202ENST00000369733 PDIA5Q14554 519 aa16.96■□□□□ 0.3
COL17A1-202ENST00000369733 TMEM154Q6P9G4 183 aa16.96■□□□□ 0.3
COL17A1-202ENST00000369733 SESTD1Q86VW0 696 aa16.96■□□□□ 0.3
COL17A1-202ENST00000369733 MDM1Q8TC05 714 aa16.96■□□□□ 0.3
COL17A1-202ENST00000369733 NRBF2Q96F24 287 aa16.96■□□□□ 0.3
COL17A1-202ENST00000369733 MSTO1Q9BUK6 570 aa16.96■□□□□ 0.3
COL17A1-202ENST00000369733 PDXKO00764 312 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 KLRC1P26715 233 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 TRIM65Q6PJ69 517 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 JAMLQ86YT9 394 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 DCAF4Q8WV16 495 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 GEMIN8Q9NWZ8 242 aaKnown RBP16.95■□□□□ 0.3
COL17A1-202ENST00000369733 PI4KBQ9UBF8 816 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 PPEF1O14829 653 aaPredicted RBP16.95■□□□□ 0.3
COL17A1-202ENST00000369733 SASH3O75995 380 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 CDO1Q16878 200 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 PAPD7Q5XG87 772 aaKnown RBP16.95■□□□□ 0.3
COL17A1-202ENST00000369733 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
COL17A1-202ENST00000369733 ERP27Q96DN0 273 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 VCPKMTQ9H867 229 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 AXIN2Q9Y2T1 843 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 INO80B-WBP1J3KQ70 363 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 NUDCD3Q8IVD9 361 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 ATL2Q8NHH9 583 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 ERGIC2Q96RQ1 377 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 INO80BQ9C086 356 aaPredicted RBP16.95■□□□□ 0.3
COL17A1-202ENST00000369733 ALG13Q9NP73 1137 aaKnown RBP16.95■□□□□ 0.3
COL17A1-202ENST00000369733 CCDC22O60826 627 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 PLEKP08567 350 aaPredicted RBP16.95■□□□□ 0.3
COL17A1-202ENST00000369733 MCF2P10911 925 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 TMEM270Q6UE05 265 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 C3orf20Q8ND61 904 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 ANKS1AQ92625 1134 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 MINPP1Q9UNW1 487 aa16.95■□□□□ 0.3
COL17A1-202ENST00000369733 hCG_2014768A0A024R1R8 64 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 MYMKA6NI61 221 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 RTN2O75298 545 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 MYBL1P10243 752 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 NACA2Q9H009 215 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 CYP4F11Q9HBI6 524 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 SMG5Q9UPR3 1016 aaKnown RBP16.94■□□□□ 0.3
COL17A1-202ENST00000369733 IVNS1ABPQ9Y6Y0 642 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 ESYT2A0FGR8 921 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 TMEM120BA0PK00 339 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 CDH16O75309 829 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 CNGA1P29973 690 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 SYDE1Q6ZW31 735 aaPredicted RBP16.94■□□□□ 0.3
COL17A1-202ENST00000369733 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
COL17A1-202ENST00000369733 SEL1LQ9UBV2 794 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 LCMT1Q9UIC8 334 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 TRAF3IP3Q9Y228 551 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 NUB1Q9Y5A7 615 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 ORC6Q9Y5N6 252 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 EMSYQ7Z589 1322 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 ARHGAP10A1A4S6 786 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 SLC16A3O15427 465 aaKnown RBP16.94■□□□□ 0.3
COL17A1-202ENST00000369733 THOC5Q13769 683 aaKnown RBP16.94■□□□□ 0.3
COL17A1-202ENST00000369733 TMEM35BQ8NCS4 154 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 NVLO15381 856 aaKnown RBP16.94■□□□□ 0.3
COL17A1-202ENST00000369733 CALB1P05937 261 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 IGBP1P78318 339 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 ZNF394Q53GI3 561 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 GRAMD4Q6IC98 578 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 DNAJC9Q8WXX5 260 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 DUSP10Q9Y6W6 482 aa16.94■□□□□ 0.3
COL17A1-202ENST00000369733 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 PDCD2Q16342 344 aaPredicted RBP16.93■□□□□ 0.3
COL17A1-202ENST00000369733 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 HEXIM2Q96MH2 286 aaKnown RBP16.93■□□□□ 0.3
COL17A1-202ENST00000369733 NPHS2Q9NP85 383 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 IP6K2Q9UHH9 426 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 SLC16A4O15374 487 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 HSPA8P11142 646 aaKnown RBP16.93■□□□□ 0.3
COL17A1-202ENST00000369733 ITIH2P19823 946 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 ARSEP51690 589 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 NIM1KQ8IY84 436 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 STK33Q9BYT3 514 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 SLC13A1Q9BZW2 595 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 TRPV6Q9H1D0 765 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 USP31Q70CQ4 1352 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 KCNA3P22001 575 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 CCND2P30279 289 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 TNFAIP1Q13829 316 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 ERP44Q9BS26 406 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 FOXP2O15409 715 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 OSTNP61366 133 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 RASSF3Q86WH2 238 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 RAPGEF5Q92565 580 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 LBHD1Q9BQE6 289 aaPredicted RBP16.93■□□□□ 0.3
COL17A1-202ENST00000369733 UTYO14607 1347 aa16.93■□□□□ 0.3
COL17A1-202ENST00000369733 USP11P51784 963 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms