RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 APPBP2Q92624 585 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 CEP95Q96GE4 821 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 EXO5Q9H790 373 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 TJP2Q9UDY2 1190 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 PNMA8BQ9ULN7 279 aaPredicted RBP10.9□□□□□ -0.66
SLF2-201ENST00000238961 RIMS2Q9UQ26 1411 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 USP14P54578 494 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 CHSY1Q86X52 802 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 ADI1Q9BV57 179 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 ARPP21Q9UBL0 812 aaPredicted RBP10.9□□□□□ -0.66
SLF2-201ENST00000238961 NFU1Q9UMS0 254 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 CEP170Q5SW79 1584 aa10.9□□□□□ -0.66
SLF2-201ENST00000238961 TLR2O60603 784 aa10.9□□□□□ -0.67
SLF2-201ENST00000238961 NUGGCQ68CJ6 796 aa10.9□□□□□ -0.67
SLF2-201ENST00000238961 DGKHQ86XP1 1220 aa10.9□□□□□ -0.67
SLF2-201ENST00000238961 FAM162AQ96A26 154 aa10.9□□□□□ -0.67
SLF2-201ENST00000238961 AATKQ6ZMQ8 1374 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 MLH1P40692 756 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 CLK1P49759 484 aaKnown RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 DHX9Q08211 1270 aaKnown RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 C6orf10Q5SRN2 563 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 KRT40Q6A162 431 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 DDI1Q8WTU0 396 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 USP44Q9H0E7 712 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 CNGB3Q9NQW8 809 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 RPRD2Q5VT52 1461 aaKnown RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 ACSL3O95573 720 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 SOX11P35716 441 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 CYP27A1Q02318 531 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 ARHGEF7Q14155 803 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 PPP2R5BQ15173 497 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 PDXDC2PQ6P474 469 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 NEK10Q6ZWH5 1172 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 RALAP11233 206 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 KRT20P35900 424 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 FAM98CQ17RN3 349 aaKnown RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 FAM26FQ5R3K3 315 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 TBC1D9BQ66K14 1250 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 CCDC103Q8IW40 242 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 CYGBQ8WWM9 190 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 SIK2Q9H0K1 926 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 BCL2L12Q9HB09 334 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 DUOX2Q9NRD8 1548 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 LINC00854A0A1B0GVQ3 168 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 HNRNPRO43390 633 aaKnown RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 SCGNO76038 276 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 C17orf53Q8N3J3 647 aaPredicted RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 COA7Q96BR5 231 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 GFPT2O94808 682 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 ADRA2BP18089 450 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 RFX8Q6ZV50 586 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 DENND6AQ8IWF6 608 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 LINS1Q8NG48 757 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 BRD8Q9H0E9 1235 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 SAYSD1Q9NPB0 183 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 DDX56Q9NY93 547 aaKnown RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 ANAPC2Q9UJX6 822 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 PKP3Q9Y446 797 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 PSMD12O00232 456 aaPredicted RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 ANGPT2O15123 496 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 MZF1P28698 734 aaPredicted RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 IREB2P48200 963 aaKnown RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 ATXN3P54252 364 aaPredicted RBP10.89□□□□□ -0.67
SLF2-201ENST00000238961 TCEAL5Q5H9L2 206 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 PLEKHA5Q9HAU0 1116 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 SPASTQ9UBP0 616 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 SYNPO2Q9UMS6 1093 aa10.89□□□□□ -0.67
SLF2-201ENST00000238961 TJP3O95049 919 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 NR2F2P24468 414 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 CAMK1Q14012 370 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
SLF2-201ENST00000238961 MSTO1Q9BUK6 570 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 PITPNM3Q9BZ71 974 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 GDAQ9Y2T3 454 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 SH3GLB1Q9Y371 365 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 CLUP10909 449 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 ABCD1P33897 745 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 MCCD1P59942 119 aaPredicted RBP10.88□□□□□ -0.67
SLF2-201ENST00000238961 SPARCL1Q14515 664 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 TMEM60Q9H2L4 133 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 PIK3R2O00459 728 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 SLC27A2O14975 620 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 ABCE1P61221 599 aaKnown RBP10.88□□□□□ -0.67
SLF2-201ENST00000238961 CDC16Q13042 620 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 HIBCHQ6NVY1 386 aaPredicted RBP10.88□□□□□ -0.67
SLF2-201ENST00000238961 PPP4R3CPQ6ZMV5 832 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 CCDC60Q8IWA6 550 aaPredicted RBP10.88□□□□□ -0.67
SLF2-201ENST00000238961 EEF2KMTQ96G04 330 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 PDE11AQ9HCR9 933 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 KLF15Q9UIH9 416 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 ZFP69BQ9UJL9 534 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 SPACA6W5XKT8 324 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 ADGBQ8N7X0 1667 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 IQCA1LA6NCM1 817 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 CSNK2BP67870 215 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 SCFD1Q8WVM8 642 aa10.88□□□□□ -0.67
SLF2-201ENST00000238961 LRRC59Q96AG4 307 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms